Histone_ChIP-seq_ENCSR000ALY
Histone_ChIP-seq ENCSR000ALY [biosample_summary="Homo sapiens mammary epithelial cell female adult (50 years)" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR000ALY |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ALY [biosamplesummary="Homo sapiens mammary epithelial cell female adult (50 years)" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: female adult (50 years) output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN038CWW|/analyses/ENCAN038CWW/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF083BCW|/files/ENCFF083BCW/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 8462445 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF244KWR|/files/ENCFF244KWR/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 6933570 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ALY | float |
Histone_ChIP-seq_ENCSR000ALY |
Histone_ChIP-seq ENCSR000ALY [biosample_summary="Homo sapiens mammary epithelial cell female adult (50 years)" and target="H3K36me3"]
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[2.12, 12.4] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF907LDT.bed.gz | 2.58 MB | 5e336ed43b1002e75c0d945892eb1f47 |
| ENCFF907LDT.bed.gz.dvc | 101.0 B | 91f0057d072e403b661ffa7a661b251b |
| ENCFF907LDT.tabix.bed.gz | 1.29 MB | 878bb6ff7e76f30124ecdce0f3d41ff4 |
| ENCFF907LDT.tabix.bed.gz.dvc | 107.0 B | e3d5ff9e1d9c5e3da048a212212d197f |
| ENCFF907LDT.tabix.bed.gz.tbi | 196.83 KB | 3275e305cc7ed0c1bb79862d1292de42 |
| ENCFF907LDT.tabix.bed.gz.tbi.dvc | 110.0 B | 7e869de12795c3c3f54e1ce8320d8b81 |
| genomic_resource.yaml | 2.49 KB | b50adbb599e99a27ee1e72c09e4342c4 |
| genomic_resource_original.yaml | 2.35 KB | a530555c623662b7c3499048f5dcf101 |
| statistics/ |