Histone_ChIP-seq_ENCSR000ALR
Histone_ChIP-seq ENCSR000ALR [biosample_summary="Homo sapiens keratinocyte female" and target="H4K20me1"]
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| Id: | Histone_ChIP-seq/ENCSR000ALR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ALR [biosamplesummary="Homo sapiens keratinocyte female" and target="H4K20me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: female output_type: replicated peaks audit_error: Processed alignments file {ENCFF978USL|/files/ENCFF978USL/} processed by ChIP-seq ENCODE3 hg19 pipeline has 3277633 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H4K20me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_internal_action: Archived analysis {ENCAN498IDN|/analyses/ENCAN498IDN/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF665MHK|/files/ENCFF665MHK/} processed by ChIP-seq ENCODE3 hg19 pipeline has 5922200 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H4K20me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF609KHG|/files/ENCFF609KHG/} processed by ChIP-seq ENCODE3 hg19 pipeline has 6044680 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H4K20me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ALR | float |
Histone_ChIP-seq_ENCSR000ALR |
Histone_ChIP-seq ENCSR000ALR [biosample_summary="Homo sapiens keratinocyte female" and target="H4K20me1"]
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[2.16, 10.8] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF431UTV.bed.gz | 204.87 KB | fdb41a4a97d32306a3dcd3f6dc897eee |
| ENCFF431UTV.bed.gz.dvc | 100.0 B | b91bbdb7a4ef4de77a8262854e974c9d |
| ENCFF431UTV.tabix.bed.gz | 114.93 KB | 5c0fff0cb7677b7c0bbce38361649bca |
| ENCFF431UTV.tabix.bed.gz.dvc | 106.0 B | f5595eb9588015dd9b34356256e1a3da |
| ENCFF431UTV.tabix.bed.gz.tbi | 51.56 KB | 957e33b173a8899792b28f46db22e6f3 |
| ENCFF431UTV.tabix.bed.gz.tbi.dvc | 109.0 B | da87fd8e382c76dcab2c4ed74f469b08 |
| genomic_resource.yaml | 2.85 KB | c043f6d4803e6ffbd1ee3bb35a6223b9 |
| genomic_resource_original.yaml | 2.73 KB | 9ad2029be9ae7cd7d8cf7ad464751e68 |
| statistics/ |