Histone_ChIP-seq_ENCSR000ALQ
Histone_ChIP-seq ENCSR000ALQ [biosample_summary="Homo sapiens keratinocyte female" and target="H3K9me1"]
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| Id: | Histone_ChIP-seq/ENCSR000ALQ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ALQ [biosamplesummary="Homo sapiens keratinocyte female" and target="H3K9me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: female output_type: replicated peaks audit_error: Processed alignments file {ENCFF496NHS|/files/ENCFF496NHS/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 4615822 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_error: Processed alignments file {ENCFF473EVC|/files/ENCFF473EVC/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 3259589 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_internal_action: Archived analysis {ENCAN477WAO|/analyses/ENCAN477WAO/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF257SFW|/files/ENCFF257SFW/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 9631245 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ALQ | float |
Histone_ChIP-seq_ENCSR000ALQ |
Histone_ChIP-seq ENCSR000ALQ [biosample_summary="Homo sapiens keratinocyte female" and target="H3K9me1"]
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[2.11, 6.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF032HAA.bed.gz | 104.37 KB | 6da02d58e92a8fad9c3489e523d39b30 |
| ENCFF032HAA.bed.gz.dvc | 100.0 B | 017e6ae1cfb38786e9a3adb95a078fb3 |
| ENCFF032HAA.tabix.bed.gz | 60.07 KB | 3e6b0d5eab83ea78750d7a7a715afea7 |
| ENCFF032HAA.tabix.bed.gz.dvc | 105.0 B | 8de5060ebbafbe0b357a4d52a4d4098e |
| ENCFF032HAA.tabix.bed.gz.tbi | 59.89 KB | eaaae0713ad3d15031b5e151c1221242 |
| ENCFF032HAA.tabix.bed.gz.tbi.dvc | 109.0 B | b178e088c9da459da69559c66cf47c8c |
| genomic_resource.yaml | 2.84 KB | a29c9e1fc8d5161fe7354366540f04d5 |
| genomic_resource_original.yaml | 2.72 KB | 2d4041f2d8142f12c666acc0e195168a |
| statistics/ |