Histone_ChIP-seq_ENCSR000ALP
Histone_ChIP-seq ENCSR000ALP [biosample_summary="Homo sapiens keratinocyte female" and target="H3K9ac"]
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| Id: | Histone_ChIP-seq/ENCSR000ALP |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ALP [biosamplesummary="Homo sapiens keratinocyte female" and target="H3K9ac"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: female output_type: replicated peaks audit_error: Processed alignments file {ENCFF039LPD|/files/ENCFF039LPD/} processed by ChIP-seq ENCODE3 hg19 pipeline has 3855585 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9ac-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_internal_action: Archived analysis {ENCAN553HVQ|/analyses/ENCAN553HVQ/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF284YVY|/files/ENCFF284YVY/} processed by ChIP-seq ENCODE3 hg19 pipeline has 5637777 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9ac-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF940EVD|/files/ENCFF940EVD/} processed by ChIP-seq ENCODE3 hg19 pipeline has 6268163 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9ac-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ALP | float |
Histone_ChIP-seq_ENCSR000ALP |
Histone_ChIP-seq ENCSR000ALP [biosample_summary="Homo sapiens keratinocyte female" and target="H3K9ac"]
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[2.06, 106] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF609GAD.bed.gz | 1.04 MB | 7943a8a55580bd2313b7c087c507bef3 |
| ENCFF609GAD.bed.gz.dvc | 101.0 B | 45a39460c06cdf74f983345feb3fd71f |
| ENCFF609GAD.tabix.bed.gz | 509.75 KB | f0a1c1a01b473d598ed7675919b1206e |
| ENCFF609GAD.tabix.bed.gz.dvc | 106.0 B | 1658218df10cb6d90f24681f7012b50a |
| ENCFF609GAD.tabix.bed.gz.tbi | 190.9 KB | 6f0c9dce1837e9c1c6b608c42833e8c1 |
| ENCFF609GAD.tabix.bed.gz.tbi.dvc | 110.0 B | 4c57a3b6de6db4a3b994d93854f13b77 |
| genomic_resource.yaml | 2.84 KB | 9c118286b0c4fc7061e64f7111c58686 |
| genomic_resource_original.yaml | 2.72 KB | a1f8eac832698d120c9d7b7ac6b78d71 |
| statistics/ |