Histone_ChIP-seq_ENCSR000ALM
Histone_ChIP-seq ENCSR000ALM [biosample_summary="Homo sapiens keratinocyte female" and target="H3K36me3"]
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| Id: | Histone_ChIP-seq/ENCSR000ALM |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ALM [biosamplesummary="Homo sapiens keratinocyte female" and target="H3K36me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 3 summary: female output_type: replicated peaks audit_error: Processed alignments file {ENCFF606DFH|/files/ENCFF606DFH/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 2360147 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_error: Processed alignments file {ENCFF574AFU|/files/ENCFF574AFU/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 4216098 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_internal_action: Archived analysis {ENCAN258FNP|/analyses/ENCAN258FNP/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF740HPY|/files/ENCFF740HPY/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 6681032 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K36me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ALM | float |
Histone_ChIP-seq_ENCSR000ALM |
Histone_ChIP-seq ENCSR000ALM [biosample_summary="Homo sapiens keratinocyte female" and target="H3K36me3"]
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[2.06, 9.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF966SIF.bed.gz | 1.0 MB | a4411019c112e9cd22ae9ad975fd59a8 |
| ENCFF966SIF.bed.gz.dvc | 101.0 B | dc9ec9864d7348806bb4693ff736ed91 |
| ENCFF966SIF.tabix.bed.gz | 576.36 KB | 147c51ca986b3d0d1ef7d86573d1da66 |
| ENCFF966SIF.tabix.bed.gz.dvc | 106.0 B | f737ae707a92e81a3ac3425ccc442ca7 |
| ENCFF966SIF.tabix.bed.gz.tbi | 164.34 KB | 89a8757f522dec918c8f4ba37a366636 |
| ENCFF966SIF.tabix.bed.gz.tbi.dvc | 110.0 B | 672198c07073eb6ab326ccc7c73874a4 |
| genomic_resource.yaml | 2.84 KB | 3d2ff1ff037b56d309ee48c07289b462 |
| genomic_resource_original.yaml | 2.72 KB | 739935f1ae9aa8e1563047f9127e6d4e |
| statistics/ |