Histone_ChIP-seq_ENCSR000ALL
Histone_ChIP-seq ENCSR000ALL [biosample_summary="Homo sapiens keratinocyte female" and target="H3K27me3"]
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| Id: | Histone_ChIP-seq/ENCSR000ALL |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ALL [biosamplesummary="Homo sapiens keratinocyte female" and target="H3K27me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: female output_type: replicated peaks audit_error: Processed alignments file {ENCFF197IFZ|/files/ENCFF197IFZ/} processed by ChIP-seq ENCODE3 hg19 pipeline has 2850530 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_error: Processed alignments file {ENCFF873WML|/files/ENCFF873WML/} processed by ChIP-seq ENCODE3 hg19 pipeline has 3836031 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_internal_action: Archived analysis {ENCAN310PLQ|/analyses/ENCAN310PLQ/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF285QUM|/files/ENCFF285QUM/} processed by ChIP-seq ENCODE3 hg19 pipeline has 6577235 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ALL | float |
Histone_ChIP-seq_ENCSR000ALL |
Histone_ChIP-seq ENCSR000ALL [biosample_summary="Homo sapiens keratinocyte female" and target="H3K27me3"]
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[2.08, 26.4] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF151HKM.bed.gz | 736.59 KB | 925d3e78ba9c484f5c4b863186b35d37 |
| ENCFF151HKM.bed.gz.dvc | 100.0 B | 35640d3048862eec2f5c394b712d07cf |
| ENCFF151HKM.tabix.bed.gz | 393.65 KB | d5369339d7379749e4a3e94bcfc387fc |
| ENCFF151HKM.tabix.bed.gz.dvc | 106.0 B | a615344a02dfeaf610cb7398d77e4dc0 |
| ENCFF151HKM.tabix.bed.gz.tbi | 137.22 KB | 3b0758d12c47e1aaf420b46ce4d38e28 |
| ENCFF151HKM.tabix.bed.gz.tbi.dvc | 110.0 B | 46cabbd8982f8d8cc6d00202d650099d |
| genomic_resource.yaml | 2.84 KB | 75280170fb3ddc61a8dbf825f61d55eb |
| genomic_resource_original.yaml | 2.72 KB | bb21f496cb2153bead5d8eea40add2f7 |
| statistics/ |