Histone_ChIP-seq_ENCSR000ALK
Histone_ChIP-seq ENCSR000ALK [biosample_summary="Homo sapiens keratinocyte female" and target="H3K27ac"]
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| Id: | Histone_ChIP-seq/ENCSR000ALK |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ALK [biosamplesummary="Homo sapiens keratinocyte female" and target="H3K27ac"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: female output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN153QHY|/analyses/ENCAN153QHY/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN153QHY|/analyses/ENCAN153QHY/} has in progress subobject document {e2c3a5ea-1af9-41d3-a711-756038bcd20f|/documents/e2c3a5ea-1af9-41d3-a711-756038bcd20f/} audit_not_compliant: Processed alignments file {ENCFF770JWP|/files/ENCFF770JWP/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 8908087 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27ac-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF051NTC|/files/ENCFF051NTC/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 7264022 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27ac-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ALK | float |
Histone_ChIP-seq_ENCSR000ALK |
Histone_ChIP-seq ENCSR000ALK [biosample_summary="Homo sapiens keratinocyte female" and target="H3K27ac"]
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[1.93, 148] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF666UYC.bed.gz | 1.6 MB | f3bcfc05dab4ef5c49508b75b75bc41b |
| ENCFF666UYC.bed.gz.dvc | 101.0 B | a2e1cff22d3d9e7f394b629abeace24b |
| ENCFF666UYC.tabix.bed.gz | 732.23 KB | 88320ec50972cf369d739202d16ef993 |
| ENCFF666UYC.tabix.bed.gz.dvc | 106.0 B | 2cc7246fa1f49104d4cf4703783c7d82 |
| ENCFF666UYC.tabix.bed.gz.tbi | 240.33 KB | 4350095e02d02364c865235465f1d63c |
| ENCFF666UYC.tabix.bed.gz.tbi.dvc | 110.0 B | 16b046ca7f1552fe78189c102b8caf3d |
| genomic_resource.yaml | 2.61 KB | 990fec9f27ad953683766894e6389cac |
| genomic_resource_original.yaml | 2.49 KB | e011baac23cc6436eba54ae8b70a5689 |
| statistics/ |