Histone_ChIP-seq_ENCSR000ALF
Histone_ChIP-seq ENCSR000ALF [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H4K20me1"]
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| Id: | Histone_ChIP-seq/ENCSR000ALF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ALF [biosamplesummary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H4K20me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: newborn output_type: replicated peaks audit_internal_action: Released analysis {ENCAN308CSM|/analyses/ENCAN308CSM/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF048JCA|/files/ENCFF048JCA/} processed by ChIP-seq ENCODE3 hg19 pipeline has 8717016 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H4K20me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF557NBO|/files/ENCFF557NBO/} processed by ChIP-seq ENCODE3 hg19 pipeline has 7175671 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H4K20me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ALF | float |
Histone_ChIP-seq_ENCSR000ALF |
Histone_ChIP-seq ENCSR000ALF [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H4K20me1"]
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[1.52, 10.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF346SGF.bed.gz | 333.03 KB | cfb404c3756a9166e2fdba9683aaede4 |
| ENCFF346SGF.bed.gz.dvc | 100.0 B | 90677cfe9ef8dd34c1f9c6fed6e13d18 |
| ENCFF346SGF.tabix.bed.gz | 177.29 KB | 69750445bb1bb871ea02f3a2980b0a58 |
| ENCFF346SGF.tabix.bed.gz.dvc | 106.0 B | adba55f899052bfae631db8fb252a27f |
| ENCFF346SGF.tabix.bed.gz.tbi | 69.61 KB | f60a815e305b1770f15a289e9a62d9d4 |
| ENCFF346SGF.tabix.bed.gz.tbi.dvc | 109.0 B | 8048ab2d84ff6368549af2d303d13497 |
| genomic_resource.yaml | 2.61 KB | d379d495fa1b7b377b3c04281dfd73ee |
| genomic_resource_original.yaml | 2.47 KB | c45de85339d9f3e5a91fb8c2277d3d93 |
| statistics/ |