Histone_ChIP-seq_ENCSR000ALE
Histone_ChIP-seq ENCSR000ALE [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K9me1"]
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| Id: | Histone_ChIP-seq/ENCSR000ALE |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000ALE [biosamplesummary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K9me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: newborn output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN180GBZ|/analyses/ENCAN180GBZ/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF337FYF|/files/ENCFF337FYF/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 5553099 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF293TJT|/files/ENCFF293TJT/} processed by ChIP-seq ENCODE3 GRCh38 pipeline has 7047190 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000ALE | float |
Histone_ChIP-seq_ENCSR000ALE |
Histone_ChIP-seq ENCSR000ALE [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K9me1"]
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[2.15, 8.27] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF736BEU.bed.gz | 72.63 KB | 9fc21565b23e202e0560c79756199801 |
| ENCFF736BEU.bed.gz.dvc | 99.0 B | 962497e33400db138e49dc61c1556e9f |
| ENCFF736BEU.tabix.bed.gz | 40.03 KB | 901696bccf25fb64bdc25a698431c36d |
| ENCFF736BEU.tabix.bed.gz.dvc | 105.0 B | 41209ad88a5c5ad8d6d363b1ecdda18c |
| ENCFF736BEU.tabix.bed.gz.tbi | 44.12 KB | f02fa9ed0acb3804fbb3b604e102f0d1 |
| ENCFF736BEU.tabix.bed.gz.tbi.dvc | 109.0 B | d71ed8ef0c159cc177b70384f86a4066 |
| genomic_resource.yaml | 2.61 KB | cc54d7c565bfd74dd655fa083bd26625 |
| genomic_resource_original.yaml | 2.47 KB | eda50a0c948d6d7b91fa68e6f7c83da3 |
| statistics/ |