Histone_ChIP-seq_ENCSR000AKS
Histone_ChIP-seq ENCSR000AKS [biosample_summary="Homo sapiens K562" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR000AKS |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AKS [biosamplesummary="Homo sapiens K562" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Archived analysis {ENCAN125LXN|/analyses/ENCAN125LXN/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Archived analysis {ENCAN125LXN|/analyses/ENCAN125LXN/} has in progress subobject document {e8b25724-61d5-4995-ae60-3f52f0ef88e1|/documents/e8b25724-61d5-4995-ae60-3f52f0ef88e1/} audit_not_compliant: Processed alignments file {ENCFF352HXD|/files/ENCFF352HXD/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 9397237 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF415GHS|/files/ENCFF415GHS/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 8138614 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AKS | float |
Histone_ChIP-seq_ENCSR000AKS |
Histone_ChIP-seq ENCSR000AKS [biosample_summary="Homo sapiens K562" and target="H3K4me1"]
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[1.92, 33.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF759NWD.bed.gz | 2.6 MB | 6e5be1674e0d7f3ddcc52b85dd278913 |
| ENCFF759NWD.bed.gz.dvc | 101.0 B | df12ed8c7a9e8bba59fbb26ad0a6aa73 |
| ENCFF759NWD.tabix.bed.gz | 1.18 MB | 3740ad39d0bbade26b4c365232c54658 |
| ENCFF759NWD.tabix.bed.gz.dvc | 107.0 B | 6010bb0406664616ecc2d7b03773fa4e |
| ENCFF759NWD.tabix.bed.gz.tbi | 263.22 KB | 51dd04cad8b6a81626d5d745c5112b20 |
| ENCFF759NWD.tabix.bed.gz.tbi.dvc | 110.0 B | a3695b5c0a1dc8f303fa34471604e68d |
| genomic_resource.yaml | 2.6 KB | 2ab93dfe177b9fd51a60c445bbcca67e |
| genomic_resource_original.yaml | 2.5 KB | 5fca98958ce795f68ddf9413231ab766 |
| statistics/ |