Histone_ChIP-seq_ENCSR000AKN
Histone_ChIP-seq ENCSR000AKN [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K4me3"]
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| Id: | Histone_ChIP-seq/ENCSR000AKN |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AKN [biosamplesummary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K4me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: newborn output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN684TUZ|/analyses/ENCAN684TUZ/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF456FFM|/files/ENCFF456FFM/} processed by ChIP-seq ENCODE3 hg19 pipeline has 7049506 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF353JMR|/files/ENCFF353JMR/} processed by ChIP-seq ENCODE3 hg19 pipeline has 6891298 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me3-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AKN | float |
Histone_ChIP-seq_ENCSR000AKN |
Histone_ChIP-seq ENCSR000AKN [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K4me3"]
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[1.59, 108] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF681KRK.bed.gz | 866.34 KB | 270c2fcee45246ec339c2945ccde6ccd |
| ENCFF681KRK.bed.gz.dvc | 100.0 B | 4b2fbad3a7fb993d109e45f43a9b9549 |
| ENCFF681KRK.tabix.bed.gz | 376.17 KB | e0cc9402b9ff9055c47f27e214277869 |
| ENCFF681KRK.tabix.bed.gz.dvc | 106.0 B | b98229a17c88dcc1e6c8dc8b61052c9d |
| ENCFF681KRK.tabix.bed.gz.tbi | 168.14 KB | ab00e8b7802e5fc61245d984d11a623e |
| ENCFF681KRK.tabix.bed.gz.tbi.dvc | 110.0 B | 637087363fd38441c30f665ad40bd90f |
| genomic_resource.yaml | 2.6 KB | 22e52a61e8cb62a75f59da34b7f2f80b |
| genomic_resource_original.yaml | 2.46 KB | f8138b50da6d4a8ba634ab1d6eb4756c |
| statistics/ |