Histone_ChIP-seq_ENCSR000AKM
Histone_ChIP-seq ENCSR000AKM [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K4me2"]
×
| Id: | Histone_ChIP-seq/ENCSR000AKM |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AKM [biosamplesummary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K4me2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: newborn output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN253XYY|/analyses/ENCAN253XYY/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN253XYY|/analyses/ENCAN253XYY/} has in progress subobject document {f5c8744e-c2ad-4fb2-ba0e-3af71bbc88f8|/documents/f5c8744e-c2ad-4fb2-ba0e-3af71bbc88f8/} audit_not_compliant: Processed alignments file {ENCFF124JVO|/files/ENCFF124JVO/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 8344541 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me2-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF952NEV|/files/ENCFF952NEV/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 9463780 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me2-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AKM | float |
Histone_ChIP-seq_ENCSR000AKM |
Histone_ChIP-seq ENCSR000AKM [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K4me2"]
|
|
[1.65, 42.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF882WZG.bed.gz | 1.75 MB | a21772e93aed0f598e6b58ac48130b5d |
| ENCFF882WZG.bed.gz.dvc | 101.0 B | 30ed8b999502dce8bb92d8194d8785b8 |
| ENCFF882WZG.tabix.bed.gz | 793.45 KB | fc3fb5484a23514a96eb3ceeb3e766e6 |
| ENCFF882WZG.tabix.bed.gz.dvc | 106.0 B | 1b25948b0521cfe7023d6e24963b0520 |
| ENCFF882WZG.tabix.bed.gz.tbi | 279.01 KB | 3d52f2dea6a4b852a74e42944cdf1ffc |
| ENCFF882WZG.tabix.bed.gz.tbi.dvc | 110.0 B | cfcdaa75275f6b9cbc10cbc35809a1c1 |
| genomic_resource.yaml | 2.98 KB | e07ce00723586d79e5eee2aa52aaf085 |
| genomic_resource_original.yaml | 2.84 KB | e3fd3cce5fa54ded689209e660025159 |
| statistics/ |