Histone_ChIP-seq_ENCSR000AKL
Histone_ChIP-seq ENCSR000AKL [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K4me1"]
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| Id: | Histone_ChIP-seq/ENCSR000AKL |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AKL [biosamplesummary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K4me1"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: newborn output_type: replicated peaks audit_internal_action: Archived analysis {ENCAN528LUL|/analyses/ENCAN528LUL/} has in progress subobject quality standard {encode3-histone-chip|/quality-standards/encode3-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF399DFC|/files/ENCFF399DFC/} processed by ChIP-seq ENCODE3 hg19 pipeline has 10104348 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF402IJP|/files/ENCFF402IJP/} processed by ChIP-seq ENCODE3 hg19 pipeline has 7774737 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me1-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AKL | float |
Histone_ChIP-seq_ENCSR000AKL |
Histone_ChIP-seq ENCSR000AKL [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K4me1"]
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[1.68, 27.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF425FRS.bed.gz | 2.38 MB | 5b2e414333328546a09e18a6dd71caeb |
| ENCFF425FRS.bed.gz.dvc | 101.0 B | a4af979d02a36cf2e4db986c56ac2109 |
| ENCFF425FRS.tabix.bed.gz | 1.1 MB | b7459027efd7656aa7ef78079eb16af3 |
| ENCFF425FRS.tabix.bed.gz.dvc | 107.0 B | 9346b4e27b95b204ed75cf69e849abcd |
| ENCFF425FRS.tabix.bed.gz.tbi | 314.14 KB | 5383ed3579416ac10ecaf1313a837683 |
| ENCFF425FRS.tabix.bed.gz.tbi.dvc | 110.0 B | 90380ca88ecfd0e26de72e26f8096c72 |
| genomic_resource.yaml | 2.6 KB | d021ae28cc9b931d8f16c563e4c15073 |
| genomic_resource_original.yaml | 2.46 KB | a9906350e905e2d9b7fd8e2d827e2be8 |
| statistics/ |