Histone_ChIP-seq_ENCSR000AKK
Histone_ChIP-seq ENCSR000AKK [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K27me3"]
×
| Id: | Histone_ChIP-seq/ENCSR000AKK |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AKK [biosamplesummary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K27me3"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: newborn output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN020OSY|/analyses/ENCAN020OSY/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN020OSY|/analyses/ENCAN020OSY/} has in progress subobject document {42f7c22b-96b0-40bd-a2f2-d07160438266|/documents/42f7c22b-96b0-40bd-a2f2-d07160438266/} audit_not_compliant: Processed alignments file {ENCFF894USA|/files/ENCFF894USA/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 9618506 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF071NXV|/files/ENCFF071NXV/} processed by ChIP-seq ENCODE4 v1.6.1 GRCh38 pipeline has 8807169 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27me3-human and investigated as a broad histone mark is 20 million usable fragments. The recommended value is > 45 million, but > 35 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AKK | float |
Histone_ChIP-seq_ENCSR000AKK |
Histone_ChIP-seq ENCSR000AKK [biosample_summary="Homo sapiens endothelial cell of umbilical vein newborn" and target="H3K27me3"]
|
|
[1.61, 27.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF977TUS.bed.gz | 1.48 MB | 2b1035636da02c92b3206322c3d5fd77 |
| ENCFF977TUS.bed.gz.dvc | 101.0 B | 58e570aa1de78197ffd8bb0316706ccc |
| ENCFF977TUS.tabix.bed.gz | 766.44 KB | ef1101f2781f5ef43e7ccfd60040d0c8 |
| ENCFF977TUS.tabix.bed.gz.dvc | 106.0 B | da917022da699c33857fe8155e8c3d88 |
| ENCFF977TUS.tabix.bed.gz.tbi | 197.52 KB | f641ff63302f7f874d40ae8f4fa336aa |
| ENCFF977TUS.tabix.bed.gz.tbi.dvc | 110.0 B | ebf3eef2a0f6e90fbb32a1cdda4ea3fa |
| genomic_resource.yaml | 2.99 KB | c640ce3b81347d2261e30094b5381ad3 |
| genomic_resource_original.yaml | 2.85 KB | e30b02e4483f55988f25a55582acf09f |
| statistics/ |