Histone_ChIP-seq_ENCSR000AKH
Histone_ChIP-seq ENCSR000AKH [biosample_summary="Homo sapiens GM12878" and target="H3K9ac"]
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| Id: | Histone_ChIP-seq/ENCSR000AKH |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AKH [biosamplesummary="Homo sapiens GM12878" and target="H3K9ac"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN055IMX|/analyses/ENCAN055IMX/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_not_compliant: Processed alignments file {ENCFF729HQN|/files/ENCFF729HQN/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline has 8517331 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9ac-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF405REQ|/files/ENCFF405REQ/} processed by ChIP-seq ENCODE4 v1.8.0 GRCh38 pipeline has 5947734 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K9ac-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AKH | float |
Histone_ChIP-seq_ENCSR000AKH |
Histone_ChIP-seq ENCSR000AKH [biosample_summary="Homo sapiens GM12878" and target="H3K9ac"]
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[1.91, 84.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF981JOU.bed.gz | 921.49 KB | 670088b8b2af0ac259a7f9e677f4e29c |
| ENCFF981JOU.bed.gz.dvc | 100.0 B | bf5680464426227da11573ae705dc07d |
| ENCFF981JOU.tabix.bed.gz | 422.41 KB | 13276bf039027a3b7a506c933f857864 |
| ENCFF981JOU.tabix.bed.gz.dvc | 106.0 B | b3ebc44786fcc0630dc3a8fb75055724 |
| ENCFF981JOU.tabix.bed.gz.tbi | 151.2 KB | 435277295a0e784205c4883f0f3be9d2 |
| ENCFF981JOU.tabix.bed.gz.tbi.dvc | 110.0 B | 0ea2eb18e7db12da2b547cccd55da35d |
| genomic_resource.yaml | 2.53 KB | a67708b7c6e70a3567d985feb4134a21 |
| genomic_resource_original.yaml | 2.42 KB | 2d26eeb748da310a59e41d4fdee05fd3 |
| statistics/ |