Histone_ChIP-seq_ENCSR000AKG
Histone_ChIP-seq ENCSR000AKG [biosample_summary="Homo sapiens GM12878" and target="H3K4me2"]
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| Id: | Histone_ChIP-seq/ENCSR000AKG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AKG [biosamplesummary="Homo sapiens GM12878" and target="H3K4me2"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN817KMK|/analyses/ENCAN817KMK/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN817KMK|/analyses/ENCAN817KMK/} has in progress subobject document {e0dcf38a-88f2-4505-a1c2-c980d065827c|/documents/e0dcf38a-88f2-4505-a1c2-c980d065827c/} audit_not_compliant: Processed alignments file {ENCFF008LEY|/files/ENCFF008LEY/} processed by ChIP-seq ENCODE4 v1.6.0 GRCh38 pipeline has 7036715 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me2-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF081ODV|/files/ENCFF081ODV/} processed by ChIP-seq ENCODE4 v1.6.0 GRCh38 pipeline has 5911809 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K4me2-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AKG | float |
Histone_ChIP-seq_ENCSR000AKG |
Histone_ChIP-seq ENCSR000AKG [biosample_summary="Homo sapiens GM12878" and target="H3K4me2"]
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[1.84, 31.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF283LNH.bed.gz | 1.88 MB | a86a7be6de9181649d58664db58cac72 |
| ENCFF283LNH.bed.gz.dvc | 101.0 B | 21faf390d2209e7f54e3b3219a74caaa |
| ENCFF283LNH.tabix.bed.gz | 930.14 KB | 8d70ddb87302a36dd061f0f3fb5e2cb8 |
| ENCFF283LNH.tabix.bed.gz.dvc | 106.0 B | 61ae53459bff2303d219cd47c5dd7646 |
| ENCFF283LNH.tabix.bed.gz.tbi | 253.76 KB | b9603eeeaf681aa579f194e8f94910a6 |
| ENCFF283LNH.tabix.bed.gz.tbi.dvc | 110.0 B | fc03e8f16cbd80079ca1aa639e1e7c77 |
| genomic_resource.yaml | 2.61 KB | 62d0bc322e65f7bca0f3b6ab728a107d |
| genomic_resource_original.yaml | 2.5 KB | 06c84a6b14ce07afe7e2c24ab3ecf9ff |
| statistics/ |