Histone_ChIP-seq_ENCSR000AKC
Histone_ChIP-seq ENCSR000AKC [biosample_summary="Homo sapiens GM12878" and target="H3K27ac"]
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| Id: | Histone_ChIP-seq/ENCSR000AKC |
| Type: | position_score |
| Version: | 0 |
| Summary: |
HistoneChIP-seq ENCSR000AKC [biosamplesummary="Homo sapiens GM12878" and target="H3K27ac"] |
| Description: |
status: released biological_replicates: Rep 1, Rep 2 summary: output_type: pseudoreplicated peaks audit_internal_action: Released analysis {ENCAN294OHP|/analyses/ENCAN294OHP/} has in progress subobject quality standard {encode4-histone-chip|/quality-standards/encode4-histone-chip/} audit_internal_action: Released analysis {ENCAN294OHP|/analyses/ENCAN294OHP/} has in progress subobject document {f3882758-5d8c-4e9c-b3bf-90d2230fc8f4|/documents/f3882758-5d8c-4e9c-b3bf-90d2230fc8f4/} audit_not_compliant: Processed alignments file {ENCFF269GKF|/files/ENCFF269GKF/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 6941456 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27ac-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) audit_not_compliant: Processed alignments file {ENCFF201OHW|/files/ENCFF201OHW/} processed by ChIP-seq ENCODE4 v1.5.1 GRCh38 pipeline has 5756711 usable fragments. The minimum ENCODE standard for each replicate in a ChIP-seq experiment targeting H3K27ac-human and investigated as a narrow histone mark is 10 million usable fragments. The recommended value is > 20 million, but > 10 million is acceptable. (See {ENCODE ChIP-seq data standards|/data-standards/chip-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| Histone_ChIP-seq_ENCSR000AKC | float |
Histone_ChIP-seq_ENCSR000AKC |
Histone_ChIP-seq ENCSR000AKC [biosample_summary="Homo sapiens GM12878" and target="H3K27ac"]
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[2.09, 95.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF023LTU.bed.gz | 1.22 MB | 16a3e221b461a64e7ec9bf8ab83c5e22 |
| ENCFF023LTU.bed.gz.dvc | 101.0 B | 7008a8ac7ae4163bb0e102db031ef550 |
| ENCFF023LTU.tabix.bed.gz | 573.87 KB | a7155536cb9501787fa84e1b4065acfa |
| ENCFF023LTU.tabix.bed.gz.dvc | 106.0 B | 2bd24c2ea8b6b096e551619d26184114 |
| ENCFF023LTU.tabix.bed.gz.tbi | 178.95 KB | 152382d3bdade381e59ddc4449418127 |
| ENCFF023LTU.tabix.bed.gz.tbi.dvc | 110.0 B | 5f430f7e309e8c2a5709439f8be7b611 |
| genomic_resource.yaml | 2.61 KB | 4c7bd7e8127e6a9778c9d2ec880a876e |
| genomic_resource_original.yaml | 2.5 KB | 429a89bbfa577d8099fea452616fb53a |
| statistics/ |