DNase-seq_ENCSR986YWZ
DNase-seq ENCSR986YWZ [biosample_summary="Homo sapiens inferior parietal cortex tissue male adult (84 years)"]
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| Id: | DNase-seq/ENCSR986YWZ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR986YWZ [biosample_summary="Homo sapiens inferior parietal cortex tissue male adult (84 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (84 years) output_type: peaks audit_error: Signal Portion of Tags (SPOT) is a measure of enrichment, analogous to the commonly used fraction of reads in peaks metric. ENCODE processed alignment files {ENCFF948ZIC|/files/ENCFF948ZIC/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ({ENCPL848KLD|/pipelines/ENCPL848KLD/}) for GRCh38 assembly have a SPOT1 score of 0.20. According to ENCODE standards, SPOT1 score of 0.4 or higher is considered a product of high quality data. Any sample with a SPOT1 score <0.3 should be targeted for replacement with a higher quality sample, and a SPOT1 score of 0.25 is considered minimally acceptable SPOT1 score of 0.25 is considered minimally acceptable for rare and hard to find primary tissues. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) audit_internal_action: Released analysis {ENCAN941SWU|/analyses/ENCAN941SWU/} has in progress subobject document {158478b6-7d93-4407-8ad6-fa794f3c348d|/documents/158478b6-7d93-4407-8ad6-fa794f3c348d/} |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR986YWZ | float |
DNase-seq_ENCSR986YWZ |
DNase-seq ENCSR986YWZ [biosample_summary="Homo sapiens inferior parietal cortex tissue male adult (84 years)"]
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[0.0337, 6.37] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF786TMD.bed.gz | 1.01 MB | 5ec617958b649300f9d62f583df1bafe |
| ENCFF786TMD.bed.gz.dvc | 101.0 B | 6eb345ab7a2c2066e7dc9d2bed73ae1f |
| ENCFF786TMD.tabix.bed.gz | 958.49 KB | e42a75d967f49437f816b645a87472fa |
| ENCFF786TMD.tabix.bed.gz.dvc | 106.0 B | b7e56614b3c984eddec77c6c9eab834a |
| ENCFF786TMD.tabix.bed.gz.tbi | 420.27 KB | 3b649950056d942614a56f28a90868f4 |
| ENCFF786TMD.tabix.bed.gz.tbi.dvc | 110.0 B | ebc2d53a0096314f3cf9794df87ac4b1 |
| genomic_resource.yaml | 2.28 KB | c362cc119774f8afeb58066727606151 |
| genomic_resource_original.yaml | 2.17 KB | 0d8d4812557f5c1c1e4b7523a46a5a04 |
| statistics/ |