Resource

Id DNase-seq/ENCSR986XLWcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR986XLW [biosample_summary="Homo sapiens lung tissue embryo (101 days)"]
Description
Labels
  • accession: ENCSR986XLW
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002048/
  • biosample_summary: Homo sapiens lung tissue embryo (101 days)
  • date_created: 2015-09-16T21:42:44.816816+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR986XLW
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: embryo (101 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR986XLW float

DNase-seq_ENCSR986XLW
DNase-seq ENCSR986XLW [biosample_summary="Homo sapiens lung tissue embryo (101 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR986XLW [2, 6.8e+03]
n
19,493,640
mean
73.2
sd
95.6

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 194936400.61% 129818
chr1 1712174 0.69% 11406
chr2 1629891 0.67% 10854
chr3 1342750 0.68% 8943
chr4 1078187 0.57% 7178
chr5 1148184 0.63% 7645
chr6 1206238 0.71% 8035
chr7 1010475 0.63% 6725
chr8 921196 0.63% 6130
chr9 825113 0.60% 5497
chr10 988275 0.74% 6585
chr11 976680 0.72% 6507
chr12 931238 0.70% 6197
chr13 580307 0.51% 3865
chr14 617710 0.58% 4113
chr15 613744 0.60% 4089
chr16 573104 0.63% 3813
chr17 730727 0.88% 4871
chr18 483676 0.60% 3221
chr19 548400 0.94% 3651
chr20 474722 0.74% 3163
chr21 230321 0.49% 1535
chr22 301839 0.59% 2011
chrX 540339 0.35% 3595
chrY 28350 0.05% 189
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 129818 20 300 150.16 150
global segment-length histogram

Files

Filename Size md5
ENCFF357EZI.bed.gz 1.23 MB 04988910d230d0d7e4b25c4f3ffcafb1
ENCFF357EZI.tabix.bed.gz 1.06 MB 1d312320c141c8d2cd6ef37c24fce9bd
ENCFF357EZI.tabix.bed.gz.tbi 568.01 KB b953441c1e5a4e54b73d3df1bbf5fcee
genomic_resource.yaml 1.35 KB 4572d569e2f266e354ef342a6e160a80
statistics/