DNase-seq_ENCSR984HIY
DNase-seq ENCSR984HIY [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)"]
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| Id: | DNase-seq/ENCSR984HIY |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR984HIY [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (38 years) output_type: peaks audit_warning: Alignment file {ENCFF409IYA|/files/ENCFF409IYA/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 27169442 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR984HIY | float |
DNase-seq_ENCSR984HIY |
DNase-seq ENCSR984HIY [biosample_summary="Homo sapiens CD8-positive, alpha-beta T cell male adult (38 years)"]
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[0.406, 54.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF512HSM.bed.gz | 340.16 KB | 32876b1f4f5d6b45c1fcd2d8537268f5 |
| ENCFF512HSM.bed.gz.dvc | 100.0 B | e89adf0b5bc2d2d0bd4751b8e8d8847c |
| ENCFF512HSM.tabix.bed.gz | 304.96 KB | 3f7a2b1f08ca70fba9b6b8044c71e926 |
| ENCFF512HSM.tabix.bed.gz.dvc | 106.0 B | 5dca3b0202aa55358e7a0eeee2dde251 |
| ENCFF512HSM.tabix.bed.gz.tbi | 180.28 KB | befbb11caa73a7072443806d92d9f514 |
| ENCFF512HSM.tabix.bed.gz.tbi.dvc | 110.0 B | fbe660a11b194a5c72a435e6046b490b |
| genomic_resource.yaml | 1.87 KB | 7b52f30268c9ecd1dc5558f06cc511d5 |
| genomic_resource_original.yaml | 1.76 KB | 864993b790ae67aa1ffa4afe3bb1c9a3 |
| statistics/ |