Resource

Id DNase-seq/ENCSR975LGKcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR975LGK [biosample_summary="Homo sapiens natural killer cell male adult (33 years)"]
Description
Labels
  • accession: ENCSR975LGK
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000623/
  • biosample_summary: Homo sapiens natural killer cell male adult (33 years)
  • date_created: 2021-09-29T23:48:43.174286+00:00
  • date_released: 2021-11-04
  • doi: 10.17989/ENCSR975LGK
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (33 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR975LGK float

DNase-seq_ENCSR975LGK

DNase-seq ENCSR975LGK [biosample_summary="Homo sapiens natural killer cell male adult (33 years)"]
HISTOGRAM FOR DNase-seq_ENCSR975LGK [0.0873, 35.4]
n
11,025,961
mean
3.34
sd
3.86

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 110259610.34% 51551
chr1 1107670 0.44% 5148
chr2 814087 0.34% 3856
chr3 570191 0.29% 2648
chr4 353887 0.19% 1610
chr5 488616 0.27% 2274
chr6 594749 0.35% 2734
chr7 493869 0.31% 2317
chr8 412749 0.28% 2001
chr9 447165 0.32% 2153
chr10 503159 0.38% 2366
chr11 605035 0.45% 2900
chr12 517035 0.39% 2387
chr13 212869 0.19% 970
chr14 387648 0.36% 1834
chr15 375236 0.37% 1802
chr16 441252 0.49% 2051
chr17 710030 0.85% 3241
chr18 195627 0.24% 908
chr19 735584 1.25% 3314
chr20 309256 0.48% 1465
chr21 146050 0.31% 694
chr22 308950 0.61% 1508
chrX 283221 0.18% 1312
chrY 12026 0.02% 58
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 51551 1 1040 213.88 200
global segment-length histogram

Files

Filename Size md5
ENCFF016INZ.bed.gz 567.06 KB 72b4559b9c36ff73dfe70a2551f6d372
ENCFF016INZ.tabix.bed.gz 522.89 KB cf7beb646b7c50f554108903ccd2009d
ENCFF016INZ.tabix.bed.gz.tbi 211.41 KB 62293d58e320f6c87bad14eb6512c000
genomic_resource.yaml 1.22 KB 0ef9cfc844faa815a4dc75cf0e760544
statistics/