DNase-seq_ENCSR970ZLG
DNase-seq ENCSR970ZLG [biosample_summary="Homo sapiens small intestine tissue male embryo (87 days)"]
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| Id: | DNase-seq/ENCSR970ZLG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR970ZLG [biosample_summary="Homo sapiens small intestine tissue male embryo (87 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (87 days) output_type: peaks audit_warning: Alignment file {ENCFF749PTL|/files/ENCFF749PTL/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 28583452 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR970ZLG | float |
DNase-seq_ENCSR970ZLG |
DNase-seq ENCSR970ZLG [biosample_summary="Homo sapiens small intestine tissue male embryo (87 days)"]
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[0.175, 18.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF583UBN.bed.gz | 585.56 KB | 92ddc2789ce134c03d4cff7a3e690bb0 |
| ENCFF583UBN.bed.gz.dvc | 100.0 B | 0b314dc2822962812b0a246cf91d3069 |
| ENCFF583UBN.tabix.bed.gz | 523.58 KB | 602936a671d4fe54b78c5394863d3722 |
| ENCFF583UBN.tabix.bed.gz.dvc | 106.0 B | df5a6ead40224f68e7c05687b3855b6d |
| ENCFF583UBN.tabix.bed.gz.tbi | 296.43 KB | fa29a802416c7876d0f2e59597e23026 |
| ENCFF583UBN.tabix.bed.gz.tbi.dvc | 110.0 B | 8f3a7fa4a78391dd17be1c0d1c649e34 |
| genomic_resource.yaml | 1.84 KB | 04af18b284fbd5d26bb7edef216f0839 |
| genomic_resource_original.yaml | 1.74 KB | 86b5c98eafd0b68c93a98887845e5785 |
| statistics/ |