Resource

Id DNase-seq/ENCSR953WJOcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR953WJO [biosample_summary="Homo sapiens left lung tissue male embryo (105 days)"]
Description
Labels
  • accession: ENCSR953WJO
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue male embryo (105 days)
  • date_created: 2015-09-16T21:42:54.251332+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR953WJO
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (105 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR953WJO float

DNase-seq_ENCSR953WJO
DNase-seq ENCSR953WJO [biosample_summary="Homo sapiens left lung tissue male embryo (105 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR953WJO [0.172, 16.9]
n
14,985,258
mean
2.03
sd
1.54

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 149852580.47% 70002
chr1 1321217 0.53% 6117
chr2 1271220 0.52% 5904
chr3 1052091 0.53% 4852
chr4 842213 0.44% 3914
chr5 888456 0.49% 4136
chr6 939962 0.55% 4294
chr7 783253 0.49% 3671
chr8 708762 0.49% 3353
chr9 624657 0.45% 2850
chr10 765233 0.57% 3569
chr11 728290 0.54% 3475
chr12 764451 0.57% 3550
chr13 451538 0.39% 2087
chr14 474363 0.44% 2229
chr15 480923 0.47% 2245
chr16 399225 0.44% 1929
chr17 551776 0.66% 2641
chr18 370824 0.46% 1709
chr19 470286 0.80% 2165
chr20 351333 0.55% 1700
chr21 164000 0.35% 780
chr22 201030 0.40% 988
chrX 357702 0.23% 1751
chrY 22453 0.04% 93
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 70002 1 1100 214.07 200
global segment-length histogram

Files

Filename Size md5
ENCFF128AWH.bed.gz 726.64 KB f0c918d6333f8e0d06eac8efa5a60299
ENCFF128AWH.tabix.bed.gz 664.65 KB ae57c6b8bb3b3da08047361a6e2ece64
ENCFF128AWH.tabix.bed.gz.tbi 341.97 KB c336e00a26abd78d86520940249113ac
genomic_resource.yaml 1.83 KB ffed2f69376edb0ffe945073d7d41f4d
statistics/