DNase-seq_ENCSR953WJO
DNase-seq ENCSR953WJO [biosample_summary="Homo sapiens left lung tissue male embryo (105 days)"]
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| Id: | DNase-seq/ENCSR953WJO |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR953WJO [biosample_summary="Homo sapiens left lung tissue male embryo (105 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (105 days) output_type: peaks audit_warning: Alignment file {ENCFF394GYL|/files/ENCFF394GYL/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 46508696 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR953WJO | float |
DNase-seq_ENCSR953WJO |
DNase-seq ENCSR953WJO [biosample_summary="Homo sapiens left lung tissue male embryo (105 days)"]
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[0.172, 16.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF128AWH.bed.gz | 726.64 KB | f0c918d6333f8e0d06eac8efa5a60299 |
| ENCFF128AWH.bed.gz.dvc | 100.0 B | 0fa882b4ce2920c1c97d37f4d29bfd63 |
| ENCFF128AWH.tabix.bed.gz | 664.65 KB | ae57c6b8bb3b3da08047361a6e2ece64 |
| ENCFF128AWH.tabix.bed.gz.dvc | 106.0 B | 36345bf1268cd28ecf35d88e2531da5f |
| ENCFF128AWH.tabix.bed.gz.tbi | 341.97 KB | c336e00a26abd78d86520940249113ac |
| ENCFF128AWH.tabix.bed.gz.tbi.dvc | 110.0 B | 878c7d5eda01dd1bed31b10d196b4c91 |
| genomic_resource.yaml | 1.83 KB | ffed2f69376edb0ffe945073d7d41f4d |
| genomic_resource_original.yaml | 1.73 KB | d5c8d6310fcc58fe0dd067d6998267a0 |
| statistics/ |