Resource

Id DNase-seq/ENCSR951XENcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR951XEN [biosample_summary="Homo sapiens muscle of arm tissue male embryo (104 days)"]
Description
Labels
  • accession: ENCSR951XEN
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001499/
  • biosample_summary: Homo sapiens muscle of arm tissue male embryo (104 days)
  • date_created: 2015-09-16T21:42:38.928248+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR951XEN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (104 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR951XEN float

DNase-seq_ENCSR951XEN
DNase-seq ENCSR951XEN [biosample_summary="Homo sapiens muscle of arm tissue male embryo (104 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR951XEN [3, 3.16e+03]
n
11,651,226
mean
46.9
sd
48.9

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 116512260.36% 77344
chr1 1025535 0.41% 6812
chr2 950396 0.39% 6319
chr3 774231 0.39% 5128
chr4 635637 0.33% 4208
chr5 666730 0.37% 4423
chr6 723956 0.42% 4804
chr7 590097 0.37% 3919
chr8 573313 0.40% 3802
chr9 486573 0.35% 3227
chr10 572076 0.43% 3798
chr11 593072 0.44% 3939
chr12 580086 0.44% 3854
chr13 336960 0.29% 2234
chr14 378830 0.35% 2509
chr15 359509 0.35% 2383
chr16 345143 0.38% 2293
chr17 452345 0.54% 3008
chr18 280752 0.35% 1860
chr19 383848 0.65% 2557
chr20 281172 0.44% 1872
chr21 147687 0.32% 980
chr22 183450 0.36% 1222
chrX 314828 0.20% 2093
chrY 15000 0.03% 100
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 77344 38 450 150.64 150
global segment-length histogram

Files

Filename Size md5
ENCFF991WDM.bed.gz 751.34 KB b65124f8091f5647ea317f331de5fa34
ENCFF991WDM.tabix.bed.gz 644.52 KB d73a0b256b42a273134deb4590a459b2
ENCFF991WDM.tabix.bed.gz.tbi 399.53 KB 6039ea399560c0fc0a3329de21d77476
genomic_resource.yaml 1.4 KB e17e15a1c1cd3ed91299d0d50df4cd81
statistics/