DNase-seq_ENCSR947POC
DNase-seq ENCSR947POC [biosample_summary="Homo sapiens brain tissue male embryo (104 days)"]
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| Id: | DNase-seq/ENCSR947POC |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR947POC [biosample_summary="Homo sapiens brain tissue male embryo (104 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (104 days) output_type: peaks audit_warning: Alignment file {ENCFF756JCY|/files/ENCFF756JCY/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 39163969 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR947POC | float |
DNase-seq_ENCSR947POC |
DNase-seq ENCSR947POC [biosample_summary="Homo sapiens brain tissue male embryo (104 days)"]
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[0.179, 42.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF276VUP.bed.gz | 1.07 MB | 91ffb592b27de71a8a5e2ee7986fe73c |
| ENCFF276VUP.bed.gz.dvc | 101.0 B | 516677aaf51146ff2aa886d4f238de1f |
| ENCFF276VUP.tabix.bed.gz | 987.95 KB | 9dd072d6fffb7616c7459bc16f6534f7 |
| ENCFF276VUP.tabix.bed.gz.dvc | 107.0 B | 7048de4c598e7f6a67b7d8bdbe8e8f13 |
| ENCFF276VUP.tabix.bed.gz.tbi | 492.17 KB | d7b1ee6c5f60b711f9aabee114a35a44 |
| ENCFF276VUP.tabix.bed.gz.tbi.dvc | 110.0 B | 9725d1f648bee6ca3ded5460065d2c3e |
| genomic_resource.yaml | 1.81 KB | 143fac3a9ee601567789502dc3c79b39 |
| genomic_resource_original.yaml | 1.72 KB | 733a874898b73021b5ed21029cb97408 |
| statistics/ |