Resource

Id DNase-seq/ENCSR945RWNcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR945RWN [biosample_summary="Homo sapiens small intestine tissue male embryo (108 days)"]
Description
Labels
  • accession: ENCSR945RWN
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002108/
  • biosample_summary: Homo sapiens small intestine tissue male embryo (108 days)
  • date_created: 2015-09-16T21:42:48.358189+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR945RWN
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (108 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR945RWN float

DNase-seq_ENCSR945RWN

DNase-seq ENCSR945RWN [biosample_summary="Homo sapiens small intestine tissue male embryo (108 days)"]
HISTOGRAM FOR DNase-seq_ENCSR945RWN [0.0213, 11.3]
n
46,037,195
mean
1.05
sd
1.24

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 460371951.43% 195573
chr1 4465392 1.79% 18544
chr2 3704039 1.53% 15839
chr3 2853466 1.44% 12226
chr4 2283477 1.20% 9802
chr5 2411911 1.33% 10334
chr6 2781832 1.63% 11655
chr7 2345350 1.47% 9976
chr8 1976736 1.36% 8445
chr9 1926171 1.39% 8236
chr10 2194841 1.64% 9339
chr11 2496294 1.85% 10590
chr12 2215390 1.66% 9448
chr13 1191540 1.04% 5078
chr14 1536052 1.43% 6410
chr15 1440222 1.41% 6103
chr16 1503545 1.66% 6440
chr17 2057798 2.47% 8595
chr18 1057470 1.32% 4438
chr19 1594063 2.72% 6667
chr20 1188827 1.84% 5109
chr21 523273 1.12% 2218
chr22 877418 1.73% 3768
chrX 1348768 0.86% 6016
chrY 63320 0.11% 297
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 195573 1 1140 235.4 220
global segment-length histogram

Files

Filename Size md5
ENCFF737LIF.bed.gz 2.06 MB 5a9ad335d84c15d86f1d9b990e59db6a
ENCFF737LIF.tabix.bed.gz 1.92 MB e0404ba15e71b7f93f7d1d96014da16c
ENCFF737LIF.tabix.bed.gz.tbi 575.62 KB 5c71a2f7b3bc60ba080016fac2743833
genomic_resource.yaml 1.23 KB e2ce8831b763e5119a39fa42e758c00f
statistics/