DNase-seq_ENCSR944GPH
DNase-seq ENCSR944GPH [biosample_summary="Homo sapiens T-helper 22 cell female adult (25 years)"]
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| Id: | DNase-seq/ENCSR944GPH |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR944GPH [biosample_summary="Homo sapiens T-helper 22 cell female adult (25 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (25 years) output_type: peaks audit_warning: Alignment file {ENCFF049YFG|/files/ENCFF049YFG/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 49650776 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR944GPH | float |
DNase-seq_ENCSR944GPH |
DNase-seq ENCSR944GPH [biosample_summary="Homo sapiens T-helper 22 cell female adult (25 years)"]
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[0.262, 96.4] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF279UKO.bed.gz | 448.86 KB | 093b0aff07cd6fe7ecd08ebaf6bac960 |
| ENCFF279UKO.bed.gz.dvc | 100.0 B | 669a4c08bf06c3b291dc8d67f493f3a6 |
| ENCFF279UKO.tabix.bed.gz | 407.71 KB | 96fabb068d9eaa2c1be829db31b23cb7 |
| ENCFF279UKO.tabix.bed.gz.dvc | 106.0 B | 0f624ed550796c94534bde50ab3797f3 |
| ENCFF279UKO.tabix.bed.gz.tbi | 187.35 KB | 820c7543498260061dedcb825952eea8 |
| ENCFF279UKO.tabix.bed.gz.tbi.dvc | 110.0 B | 374dd05c021dd8fe6dd3d1d3de11fc6c |
| genomic_resource.yaml | 1.83 KB | 16aa25c25dfdd5ecd06f73a4964b8be0 |
| genomic_resource_original.yaml | 1.73 KB | aa29b659644f6f157ebec018ba52980e |
| statistics/ |