Resource

Id DNase-seq/ENCSR935EVZcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR935EVZ [biosample_summary="Homo sapiens left lung tissue male embryo (115 days)"]
Description
Labels
  • accession: ENCSR935EVZ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002168/
  • biosample_summary: Homo sapiens left lung tissue male embryo (115 days)
  • date_created: 2015-09-16T21:42:54.434525+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR935EVZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male embryo (115 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR935EVZ float

DNase-seq_ENCSR935EVZ
DNase-seq ENCSR935EVZ [biosample_summary="Homo sapiens left lung tissue male embryo (115 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR935EVZ [2, 2.16e+04]
n
31,441,046
mean
156
sd
308

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 314410460.98% 209287
chr1 2799438 1.12% 18640
chr2 2607697 1.08% 17343
chr3 2087209 1.05% 13895
chr4 1661309 0.87% 11043
chr5 1790602 0.99% 11915
chr6 1909481 1.12% 12706
chr7 1623552 1.02% 10811
chr8 1456548 1.00% 9698
chr9 1324921 0.96% 8821
chr10 1560688 1.17% 10392
chr11 1579280 1.17% 10517
chr12 1494750 1.12% 9951
chr13 913110 0.80% 6074
chr14 1000406 0.93% 6657
chr15 986933 0.97% 6572
chr16 983899 1.09% 6548
chr17 1247116 1.50% 8312
chr18 762821 0.95% 5075
chr19 961456 1.64% 6408
chr20 796711 1.24% 5307
chr21 383520 0.82% 2553
chr22 531280 1.05% 3538
chrX 933619 0.60% 6213
chrY 44700 0.08% 298
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 209287 9 450 150.23 150
global segment-length histogram

Files

Filename Size md5
ENCFF289XNF.bed.gz 1.98 MB 557f035ea070bc3c847183427cc0af15
ENCFF289XNF.tabix.bed.gz 1.71 MB 96b125066f0c80c4515d38dbb8674b78
ENCFF289XNF.tabix.bed.gz.tbi 708.36 KB 912a0e2055a7ebd91fc4e828e2bb9f25
genomic_resource.yaml 1.39 KB b939d9af023038706d1f8b4d00bcf76f
statistics/