DNase-seq_ENCSR932DHT
DNase-seq ENCSR932DHT [biosample_summary="Homo sapiens renal cortex interstitium tissue female embryo (96 days)"]
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| Id: | DNase-seq/ENCSR932DHT |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR932DHT [biosample_summary="Homo sapiens renal cortex interstitium tissue female embryo (96 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (96 days) output_type: peaks audit_warning: Alignment file {ENCFF791WZV|/files/ENCFF791WZV/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 32697329 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR932DHT | float |
DNase-seq_ENCSR932DHT |
DNase-seq ENCSR932DHT [biosample_summary="Homo sapiens renal cortex interstitium tissue female embryo (96 days)"]
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[0.215, 22.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF341YUR.bed.gz | 664.79 KB | 2ac1fd6f2a83e4208decb596e3d9ea7d |
| ENCFF341YUR.bed.gz.dvc | 100.0 B | b44afb6abfaef17e306a71b2e6fbca68 |
| ENCFF341YUR.tabix.bed.gz | 596.03 KB | 3e96feff01f44c0f956dfc04e79405ad |
| ENCFF341YUR.tabix.bed.gz.dvc | 106.0 B | 7dfda0729c5a88e4e1e8e35c7f9b4a5c |
| ENCFF341YUR.tabix.bed.gz.tbi | 325.42 KB | f3f9966cfcbfcac30b46215bfff3637e |
| ENCFF341YUR.tabix.bed.gz.tbi.dvc | 110.0 B | cc4f3077c869d5b91ddd1d9c59869eff |
| genomic_resource.yaml | 1.88 KB | c65ea49c1cd92fba817b39bca470a2a8 |
| genomic_resource_original.yaml | 1.77 KB | e5b02ecf47cbfc1c3a14c200c4e0b912 |
| statistics/ |