Resource

Id DNase-seq/ENCSR931UQBcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR931UQB [biosample_summary="Homo sapiens small intestine tissue male adult (34 years)"]
Description
Labels
  • accession: ENCSR931UQB
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002108/
  • biosample_summary: Homo sapiens small intestine tissue male adult (34 years)
  • date_created: 2015-09-16T21:42:48.852140+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR931UQB
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (34 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR931UQB float

DNase-seq_ENCSR931UQB
DNase-seq ENCSR931UQB [biosample_summary="Homo sapiens small intestine tissue male adult (34 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR931UQB [6, 9.74e+04]
n
38,667,070
mean
275
sd
477

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 386670701.20% 257504
chr1 3722899 1.50% 24795
chr2 3151007 1.30% 20986
chr3 2461000 1.24% 16383
chr4 2001673 1.05% 13329
chr5 2037227 1.12% 13565
chr6 2344288 1.37% 15612
chr7 1928664 1.21% 12840
chr8 1649711 1.14% 10985
chr9 1623810 1.17% 10818
chr10 1843882 1.38% 12285
chr11 2007061 1.49% 13371
chr12 1903300 1.43% 12671
chr13 1022693 0.89% 6805
chr14 1269147 1.19% 8451
chr15 1221781 1.20% 8135
chr16 1264382 1.40% 8419
chr17 1679241 2.02% 11184
chr18 890989 1.11% 5936
chr19 1172607 2.00% 7811
chr20 1024439 1.59% 6824
chr21 457161 0.98% 3044
chr22 718800 1.41% 4787
chrX 1166008 0.75% 7768
chrY 105300 0.18% 700
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 257504 15 443 150.16 150
global segment-length histogram

Files

Filename Size md5
ENCFF731WZI.bed.gz 2.46 MB d16784347893287a3e0c53da0cb69511
ENCFF731WZI.tabix.bed.gz 2.13 MB 01e827a9003f8b1faa308d5e5dddd759
ENCFF731WZI.tabix.bed.gz.tbi 700.36 KB 1f2c9161dbdc8f9dd6671d72e684da6d
genomic_resource.yaml 1.4 KB d5e16637a57494a232f635fc0b6b2d2f
statistics/