DNase-seq_ENCSR930AUG
DNase-seq ENCSR930AUG [biosample_summary="Homo sapiens right lung tissue female embryo (108 days)"]
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| Id: | DNase-seq/ENCSR930AUG |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR930AUG [biosample_summary="Homo sapiens right lung tissue female embryo (108 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (108 days) output_type: peaks audit_warning: Alignment file {ENCFF560LXP|/files/ENCFF560LXP/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 40282570 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR930AUG | float |
DNase-seq_ENCSR930AUG |
DNase-seq ENCSR930AUG [biosample_summary="Homo sapiens right lung tissue female embryo (108 days)"]
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[0.174, 44.7] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF673OFD.bed.gz | 990.38 KB | 957874760f9180280814ac9d8fe8758d |
| ENCFF673OFD.bed.gz.dvc | 101.0 B | 37e11a4d7ef3f0baba4c81dab3e94d94 |
| ENCFF673OFD.tabix.bed.gz | 882.51 KB | 56b615abb54d7a30560015aa2a5e76c4 |
| ENCFF673OFD.tabix.bed.gz.dvc | 106.0 B | 318458ab32312f474885dd7d16100d55 |
| ENCFF673OFD.tabix.bed.gz.tbi | 466.18 KB | 566e08510dfc62f4b0da778d345e39cb |
| ENCFF673OFD.tabix.bed.gz.tbi.dvc | 110.0 B | 559efe0201fd34a4f9db59e939fc8790 |
| genomic_resource.yaml | 1.84 KB | b13a6aaa8fa89ecc66a20c86f3fcd34c |
| genomic_resource_original.yaml | 1.74 KB | f491b369162a62e9d35101d8fc18f261 |
| statistics/ |