Resource

Id DNase-seq/ENCSR928WMUcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR928WMU [biosample_summary="Homo sapiens heart right ventricle tissue male adult (66 years)"]
Description
Labels
  • accession: ENCSR928WMU
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0002080/
  • biosample_summary: Homo sapiens heart right ventricle tissue male adult (66 years)
  • date_created: 2019-09-12T18:22:17.914398+00:00
  • date_released: 2020-09-28
  • doi: 10.17989/ENCSR928WMU
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (66 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR928WMU float

DNase-seq_ENCSR928WMU
DNase-seq ENCSR928WMU [biosample_summary="Homo sapiens heart right ventricle tissue male adult (66 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR928WMU [0.044, 20]
n
15,541,621
mean
1.87
sd
2.12

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 155416210.48% 82809
chr1 1513291 0.61% 8000
chr2 1132317 0.47% 6145
chr3 963501 0.49% 5161
chr4 605123 0.32% 3307
chr5 790375 0.44% 4240
chr6 867474 0.51% 4651
chr7 711473 0.45% 3830
chr8 664656 0.46% 3560
chr9 672377 0.49% 3577
chr10 759984 0.57% 4092
chr11 855627 0.63% 4529
chr12 776637 0.58% 4121
chr13 342271 0.30% 1858
chr14 480205 0.45% 2563
chr15 541989 0.53% 2906
chr16 588521 0.65% 3106
chr17 816743 0.98% 4250
chr18 295236 0.37% 1620
chr19 770385 1.31% 3831
chr20 449966 0.70% 2396
chr21 185187 0.40% 982
chr22 347660 0.68% 1846
chrX 393029 0.25% 2148
chrY 17594 0.03% 90
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 82809 1 760 187.68 180
global segment-length histogram

Files

Filename Size md5
ENCFF461LFX.bed.gz 914.24 KB fd86ad67060779cf163414fcca21a5e1
ENCFF461LFX.tabix.bed.gz 828.99 KB ac981749502d0d72dd0a3de6f4ee6871
ENCFF461LFX.tabix.bed.gz.tbi 356.0 KB bcc1b939dc2219d63f0742ae13c2fd69
genomic_resource.yaml 2.06 KB bea39b0ceec9399c0d57d6ce379dc876
statistics/