DNase-seq_ENCSR924IHU
DNase-seq ENCSR924IHU [biosample_summary="Homo sapiens posterior cingulate gyrus tissue female adult (84 years)"]
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| Id: | DNase-seq/ENCSR924IHU |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR924IHU [biosample_summary="Homo sapiens posterior cingulate gyrus tissue female adult (84 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (84 years) output_type: peaks audit_warning: Signal Portion of Tags (SPOT) is a measure of enrichment, analogous to the commonly used fraction of reads in peaks metric. ENCODE processed alignment files {ENCFF553KDH|/files/ENCFF553KDH/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ({ENCPL848KLD|/pipelines/ENCPL848KLD/}) for GRCh38 assembly have a SPOT1 score of 0.30. According to ENCODE standards, SPOT1 score of 0.4 or higher is considered a product of high quality data. Any sample with a SPOT1 score <0.3 should be targeted for replacement with a higher quality sample, and a SPOT1 score of 0.25 is considered minimally acceptable SPOT1 score of 0.25 is considered minimally acceptable for rare and hard to find primary tissues. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR924IHU | float |
DNase-seq_ENCSR924IHU |
DNase-seq ENCSR924IHU [biosample_summary="Homo sapiens posterior cingulate gyrus tissue female adult (84 years)"]
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[0.0637, 13.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF900IJE.bed.gz | 912.79 KB | 27120ece83044c78ba050d7606cb74dc |
| ENCFF900IJE.bed.gz.dvc | 100.0 B | c4ac109180bdf5a8a80a31618abcb6c5 |
| ENCFF900IJE.tabix.bed.gz | 837.34 KB | 33cf4cb7ae582b35cb66b80778f34658 |
| ENCFF900IJE.tabix.bed.gz.dvc | 106.0 B | f31c6fd7578ec4f7a59b21caf83b5b10 |
| ENCFF900IJE.tabix.bed.gz.tbi | 253.56 KB | 7438936bbd39a7f6b26165c51c1a1485 |
| ENCFF900IJE.tabix.bed.gz.tbi.dvc | 110.0 B | 0fbbfbdd392d26e000f36eac2b169240 |
| genomic_resource.yaml | 2.09 KB | 2d9f39ea05b2b2b4b0b08a3a1b64cd37 |
| genomic_resource_original.yaml | 1.97 KB | d3d06ad6a21eae2082a75258d9d157c1 |
| statistics/ |