Resource

Id DNase-seq/ENCSR895GSYcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR895GSY [biosample_summary="Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)"]
Description
Labels
  • accession: ENCSR895GSY
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_NTR_0000492/
  • biosample_summary: Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)
  • date_created: 2019-05-16T16:11:51.945454+00:00
  • date_released: 2020-10-02
  • doi: 10.17989/ENCSR895GSY
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: male adult (60 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR895GSY float

DNase-seq_ENCSR895GSY
DNase-seq ENCSR895GSY [biosample_summary="Homo sapiens Right ventricle myocardium superior tissue male adult (60 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR895GSY [0.0493, 58.5]
n
26,499,596
mean
2.14
sd
3.79

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 264995960.82% 144760
chr1 2360017 0.95% 12859
chr2 1891541 0.78% 10487
chr3 1353078 0.68% 7519
chr4 1014692 0.53% 5535
chr5 1158386 0.64% 6406
chr6 1007120 0.59% 5742
chr7 1421866 0.89% 7828
chr8 1136726 0.78% 6136
chr9 1304386 0.94% 7105
chr10 1266265 0.95% 6952
chr11 1647652 1.22% 8785
chr12 1158812 0.87% 6403
chr13 482561 0.42% 2657
chr14 925975 0.87% 4996
chr15 787131 0.77% 4423
chr16 1247961 1.38% 6725
chr17 1674185 2.01% 9043
chr18 371062 0.46% 2130
chr19 1315827 2.24% 7015
chr20 923861 1.43% 5033
chr21 494876 1.06% 2620
chr22 1044289 2.05% 5558
chrX 494950 0.32% 2705
chrY 16377 0.03% 98
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 144760 1 1120 183.06 180
global segment-length histogram

Files

Filename Size md5
ENCFF741VGA.bed.gz 1.51 MB 95ced28ac9d68faef39621447410ecbc
ENCFF741VGA.tabix.bed.gz 1.39 MB 49bac680dc7a3b16014d4175e6357384
ENCFF741VGA.tabix.bed.gz.tbi 367.83 KB 87d164a9aa87af599ea8326b0f6c1944
genomic_resource.yaml 1.29 KB 12f2a3694fdd6782f1b6b4f1dd305c0f
statistics/