DNase-seq_ENCSR891VOV
DNase-seq ENCSR891VOV [biosample_summary="Homo sapiens B cell female adult (34 years)"]
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| Id: | DNase-seq/ENCSR891VOV |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR891VOV [biosample_summary="Homo sapiens B cell female adult (34 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (34 years) output_type: peaks audit_warning: Alignment file {ENCFF286GWD|/files/ENCFF286GWD/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 23443095 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR891VOV | float |
DNase-seq_ENCSR891VOV |
DNase-seq ENCSR891VOV [biosample_summary="Homo sapiens B cell female adult (34 years)"]
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[0.3, 28.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF245RKH.bed.gz | 369.02 KB | a381ed509ba480bde3576e1ae8e5844e |
| ENCFF245RKH.bed.gz.dvc | 100.0 B | d8744c8981f8f19992e1b49c871e127d |
| ENCFF245RKH.tabix.bed.gz | 334.21 KB | e3d29527242894b8b6d05f260a15f5b0 |
| ENCFF245RKH.tabix.bed.gz.dvc | 106.0 B | 45c89711d4d36840156d527bff423de3 |
| ENCFF245RKH.tabix.bed.gz.tbi | 193.07 KB | 4d0cd36dda096693b82248b064d34ff0 |
| ENCFF245RKH.tabix.bed.gz.tbi.dvc | 110.0 B | 99d6bf378cd554839e6a041e714497cb |
| genomic_resource.yaml | 1.8 KB | 15707de356299583c250389dc94c3770 |
| genomic_resource_original.yaml | 1.71 KB | 798b36547dd89bcb0bf80e845789b437 |
| statistics/ |