Resource
| Id | DNase-seq/ENCSR867XFA |
|---|---|
| Type | position_score |
| Version | 0 |
| Summary | DNase-seq ENCSR867XFA [biosample_summary="Homo sapiens left colon tissue female adult (59 years)"] |
| Description |
status: released biological_replicates: Rep 1 summary: female adult (59 years) output_type: peaks |
| Labels |
|
Scores (1)
| ID | Type | Default annotation | Description | Histogram | Range | Summary |
|---|---|---|---|---|---|---|
| DNase-seq_ENCSR867XFA | float |
DNase-seq_ENCSR867XFA |
DNase-seq ENCSR867XFA [biosample_summary="Homo sapiens left colon tissue female adult (59 years)"]
|
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[0.0544, 33.3] |
|
n counts base pairs; sd is the population standard deviation.
Coverage
| Chromosome | Covered positions | Covered % | Segments |
|---|---|---|---|
| all chromosomes | 20884681 | 0.65% | 110995 |
| chr1 | 2026704 | 0.81% | 10742 |
| chr2 | 1690410 | 0.70% | 8977 |
| chr3 | 1081078 | 0.55% | 5906 |
| chr4 | 767747 | 0.40% | 4154 |
| chr5 | 918563 | 0.51% | 4938 |
| chr6 | 917154 | 0.54% | 5036 |
| chr7 | 1031739 | 0.65% | 5481 |
| chr8 | 853888 | 0.59% | 4580 |
| chr9 | 1034651 | 0.75% | 5434 |
| chr10 | 1173621 | 0.88% | 6235 |
| chr11 | 1281208 | 0.95% | 6679 |
| chr12 | 873495 | 0.66% | 4716 |
| chr13 | 357593 | 0.31% | 1942 |
| chr14 | 743892 | 0.69% | 3938 |
| chr15 | 637381 | 0.62% | 3466 |
| chr16 | 851160 | 0.94% | 4530 |
| chr17 | 1198211 | 1.44% | 6247 |
| chr18 | 371515 | 0.46% | 2012 |
| chr19 | 1020839 | 1.74% | 5154 |
| chr20 | 657445 | 1.02% | 3489 |
| chr21 | 351871 | 0.75% | 1805 |
| chr22 | 637727 | 1.25% | 3357 |
| chrX | 406453 | 0.26% | 2174 |
| chrY | 336 | <0.01% | 3 |
| 3342 contigs with no values (129077085 bp) | 0 | 0.00% | 0 |
Segment lengths
| segments | min | max | mean | median | |
|---|---|---|---|---|---|
| segments | 110995 | 1 | 1340 | 188.16 | 180 |
Files
| Filename | Size | md5 |
|---|---|---|
| ENCFF341AEQ.bed.gz | 1.16 MB | 997f828fef49e07dc238a0db68b0a03d |
| ENCFF341AEQ.tabix.bed.gz | 1.06 MB | 21c1a6fe70e34b70c3cdefb936de1f46 |
| ENCFF341AEQ.tabix.bed.gz.tbi | 325.76 KB | 81f3921c2573472cc7ba2ecfebdd8ffa |
| genomic_resource.yaml | 1.22 KB | 98cafdb4984aa32d53076ed2df45c303 |
| statistics/ |
