DNase-seq_ENCSR863LZT
DNase-seq ENCSR863LZT [biosample_summary="Homo sapiens T-cell male adult (39 years)"]
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| Id: | DNase-seq/ENCSR863LZT |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR863LZT [biosample_summary="Homo sapiens T-cell male adult (39 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (39 years) output_type: peaks audit_warning: Alignment file {ENCFF167LIP|/files/ENCFF167LIP/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 41667152 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR863LZT | float |
DNase-seq_ENCSR863LZT |
DNase-seq ENCSR863LZT [biosample_summary="Homo sapiens T-cell male adult (39 years)"]
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[0.289, 99.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF616TIS.bed.gz | 450.25 KB | 17af65ac8c1c92643ee06da2a771b651 |
| ENCFF616TIS.bed.gz.dvc | 100.0 B | d385cd401697049e70eeae7c54b39d2c |
| ENCFF616TIS.tabix.bed.gz | 406.69 KB | 6c4f3420c8d7e3970fd7c1600e1ad299 |
| ENCFF616TIS.tabix.bed.gz.dvc | 106.0 B | d00427460e6c5a10171501a85aae3bea |
| ENCFF616TIS.tabix.bed.gz.tbi | 206.61 KB | 333fafe19477053bc25160428f1002e4 |
| ENCFF616TIS.tabix.bed.gz.tbi.dvc | 110.0 B | 96bec5ae0df46d578814ca936cf1561e |
| genomic_resource.yaml | 1.79 KB | 5609665b190433db5ce186b183462d07 |
| genomic_resource_original.yaml | 1.7 KB | 4a361adddb274b74cebb6b36b379a513 |
| statistics/ |