DNase-seq_ENCSR861NUH
DNase-seq ENCSR861NUH [biosample_summary="Homo sapiens muscle of leg tissue male embryo (104 days)"]
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| Id: | DNase-seq/ENCSR861NUH |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR861NUH [biosample_summary="Homo sapiens muscle of leg tissue male embryo (104 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male embryo (104 days) output_type: peaks audit_warning: Alignment file {ENCFF765ERD|/files/ENCFF765ERD/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 30928946 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR861NUH | float |
DNase-seq_ENCSR861NUH |
DNase-seq ENCSR861NUH [biosample_summary="Homo sapiens muscle of leg tissue male embryo (104 days)"]
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[0.227, 28.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF632GZT.bed.gz | 644.26 KB | 856e999d06c4755978c9b92c2561aa4e |
| ENCFF632GZT.bed.gz.dvc | 100.0 B | 8213f7e8d04e76f056392786249a0436 |
| ENCFF632GZT.tabix.bed.gz | 572.17 KB | 8df77559d6e74c45489e90ac34dd8b99 |
| ENCFF632GZT.tabix.bed.gz.dvc | 106.0 B | c860906f482a24a0520e625c6c91cbee |
| ENCFF632GZT.tabix.bed.gz.tbi | 336.4 KB | 386d00ab6a1eaee25b76152534fba3c2 |
| ENCFF632GZT.tabix.bed.gz.tbi.dvc | 110.0 B | 4dc28ea8362356dd882f25c7cb4a37b2 |
| genomic_resource.yaml | 1.84 KB | 7f97f10eaa24e3723961112606d07666 |
| genomic_resource_original.yaml | 1.74 KB | 4616552f25a5de38c16999f53480993e |
| statistics/ |