DNase-seq_ENCSR859KGQ
DNase-seq ENCSR859KGQ [biosample_summary="Homo sapiens right lung tissue female embryo (107 days)"]
×
| Id: | DNase-seq/ENCSR859KGQ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR859KGQ [biosample_summary="Homo sapiens right lung tissue female embryo (107 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (107 days) output_type: peaks audit_warning: Alignment file {ENCFF182JHA|/files/ENCFF182JHA/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 30929648 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
|
| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR859KGQ | float |
DNase-seq_ENCSR859KGQ |
DNase-seq ENCSR859KGQ [biosample_summary="Homo sapiens right lung tissue female embryo (107 days)"]
|
|
[0.227, 24.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF077UQA.bed.gz | 639.9 KB | 3b568d6036105967e513c5bbed8c7eb9 |
| ENCFF077UQA.bed.gz.dvc | 100.0 B | 7b85caadf8b9c59528bba22f02daf28b |
| ENCFF077UQA.tabix.bed.gz | 577.06 KB | 1d100eb0d530cb0f6d512b95cb123718 |
| ENCFF077UQA.tabix.bed.gz.dvc | 106.0 B | 6641d3fce60ec6ed26ba48bfebaea2ab |
| ENCFF077UQA.tabix.bed.gz.tbi | 318.3 KB | 777646cb33f2b0b1fd2577d9e56d33f2 |
| ENCFF077UQA.tabix.bed.gz.tbi.dvc | 110.0 B | 111935ca32616963c979037ed2d63a87 |
| genomic_resource.yaml | 1.84 KB | 9f741207b6dfa0acd42da34b4b19b1f9 |
| genomic_resource_original.yaml | 1.74 KB | 92a10b5aa2003c2bbfd747b5bf0e3f0e |
| statistics/ |