DNase-seq_ENCSR851ZFT
DNase-seq ENCSR851ZFT [biosample_summary="Homo sapiens renal cortex interstitium tissue female embryo (89 days)"]
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| Id: | DNase-seq/ENCSR851ZFT |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR851ZFT [biosample_summary="Homo sapiens renal cortex interstitium tissue female embryo (89 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (89 days) output_type: peaks audit_warning: Alignment file {ENCFF971YBX|/files/ENCFF971YBX/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 35994558 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR851ZFT | float |
DNase-seq_ENCSR851ZFT |
DNase-seq ENCSR851ZFT [biosample_summary="Homo sapiens renal cortex interstitium tissue female embryo (89 days)"]
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[0.167, 23.8] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF258PML.bed.gz | 724.12 KB | e4a8026eea2bf42f351131da150c0e2c |
| ENCFF258PML.bed.gz.dvc | 100.0 B | 49a6a0a14721f637e1c0d86a498e3c87 |
| ENCFF258PML.tabix.bed.gz | 646.31 KB | 163f7d566447f646bd9111e3a1c2f57d |
| ENCFF258PML.tabix.bed.gz.dvc | 106.0 B | 9b91d1729f842baa285d4606ac5272c6 |
| ENCFF258PML.tabix.bed.gz.tbi | 359.5 KB | b26f0fc9be6a1c3220535138bd2f4a42 |
| ENCFF258PML.tabix.bed.gz.tbi.dvc | 110.0 B | d5833145a500148851866ecd02d1dffe |
| genomic_resource.yaml | 1.88 KB | 5f8bc609e6f59e9191c1948521010185 |
| genomic_resource_original.yaml | 1.77 KB | bcaef5fbecca09873bfbe9e03e7f9996 |
| statistics/ |