DNase-seq_ENCSR847RSJ
DNase-seq ENCSR847RSJ [biosample_summary="Homo sapiens lung tissue female embryo (96 days)"]
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| Id: | DNase-seq/ENCSR847RSJ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR847RSJ [biosample_summary="Homo sapiens lung tissue female embryo (96 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (96 days) output_type: peaks audit_warning: Alignment file {ENCFF052YVD|/files/ENCFF052YVD/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 36999813 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR847RSJ | float |
DNase-seq_ENCSR847RSJ |
DNase-seq ENCSR847RSJ [biosample_summary="Homo sapiens lung tissue female embryo (96 days)"]
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[0.19, 30.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF423WOR.bed.gz | 884.42 KB | 550aaeb5b14e05c28c2ea0a70b9e966a |
| ENCFF423WOR.bed.gz.dvc | 100.0 B | 94e7f227a3849700d5f072d801d1737e |
| ENCFF423WOR.tabix.bed.gz | 793.08 KB | 57e113f8ca36455d5bd7054806f3b44b |
| ENCFF423WOR.tabix.bed.gz.dvc | 106.0 B | c1acec3c159abb741f6fe90347b25414 |
| ENCFF423WOR.tabix.bed.gz.tbi | 423.59 KB | 43d29c8d424f666469d13236fa33a3bb |
| ENCFF423WOR.tabix.bed.gz.tbi.dvc | 110.0 B | eff47d0afcf0303e98b6f228bd2db41a |
| genomic_resource.yaml | 1.82 KB | 7047bea7eb24bb932d38ae235e29e566 |
| genomic_resource_original.yaml | 1.72 KB | ec7466ea16ff99d76430f42b7a08ae6a |
| statistics/ |