DNase-seq_ENCSR845MEJ
DNase-seq ENCSR845MEJ [biosample_summary="Homo sapiens right lung tissue female embryo (117 days)"]
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| Id: | DNase-seq/ENCSR845MEJ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR845MEJ [biosample_summary="Homo sapiens right lung tissue female embryo (117 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (117 days) output_type: peaks audit_warning: Alignment file {ENCFF732IXC|/files/ENCFF732IXC/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 27803632 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR845MEJ | float |
DNase-seq_ENCSR845MEJ |
DNase-seq ENCSR845MEJ [biosample_summary="Homo sapiens right lung tissue female embryo (117 days)"]
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[0.252, 12.6] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF138YDL.bed.gz | 489.76 KB | e5b6d65ba51a79ada47c50488f27f5b4 |
| ENCFF138YDL.bed.gz.dvc | 100.0 B | 3124366c50605a9a5dfcfd790c170052 |
| ENCFF138YDL.tabix.bed.gz | 440.67 KB | ef3d2450c7c54ea7714f6e73038b3d24 |
| ENCFF138YDL.tabix.bed.gz.dvc | 106.0 B | 59f150399935a61c5cf0b4242e8c7c4b |
| ENCFF138YDL.tabix.bed.gz.tbi | 267.44 KB | 2daf782259248bc61472820b054e23b0 |
| ENCFF138YDL.tabix.bed.gz.tbi.dvc | 110.0 B | 3e69c0b24a59b3a72ca3f9e794e22027 |
| genomic_resource.yaml | 1.84 KB | 635bfc08f4fefc336b9e8872ee4e572c |
| genomic_resource_original.yaml | 1.74 KB | b64c73892f1948dfae230c860da91061 |
| statistics/ |