DNase-seq_ENCSR837ZSS
DNase-seq ENCSR837ZSS [biosample_summary="Homo sapiens T-cell female adult (19 years)"]
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| Id: | DNase-seq/ENCSR837ZSS |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR837ZSS [biosample_summary="Homo sapiens T-cell female adult (19 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (19 years) output_type: peaks audit_warning: Alignment file {ENCFF824MHY|/files/ENCFF824MHY/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 30630586 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR837ZSS | float |
DNase-seq_ENCSR837ZSS |
DNase-seq ENCSR837ZSS [biosample_summary="Homo sapiens T-cell female adult (19 years)"]
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[0.36, 51.1] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF487LCQ.bed.gz | 358.31 KB | 26e5a23a6b089f3f740574813965a33f |
| ENCFF487LCQ.bed.gz.dvc | 100.0 B | 3d7cd5ddbd088bac690dd0ed13c85625 |
| ENCFF487LCQ.tabix.bed.gz | 324.64 KB | 08264a4687af8b0be851dca32d31b27d |
| ENCFF487LCQ.tabix.bed.gz.dvc | 106.0 B | 02a02215ede7adca8f11177b78ccb905 |
| ENCFF487LCQ.tabix.bed.gz.tbi | 177.9 KB | 9b9ea32b146074a6a05c939522ca3421 |
| ENCFF487LCQ.tabix.bed.gz.tbi.dvc | 110.0 B | faaa25e705c70d06491a9040ad450812 |
| genomic_resource.yaml | 1.8 KB | 63d7cc0b23a8e49027393d31776f6bf4 |
| genomic_resource_original.yaml | 1.71 KB | 280cb82e71eb53482260cbb4619d294a |
| statistics/ |