DNase-seq_ENCSR828FVZ
DNase-seq ENCSR828FVZ [biosample_summary="Homo sapiens body of pancreas tissue female adult (53 years)"]
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| Id: | DNase-seq/ENCSR828FVZ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR828FVZ [biosample_summary="Homo sapiens body of pancreas tissue female adult (53 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (53 years) output_type: peaks audit_internal_action: Archived analysis {ENCAN911LZE|/analyses/ENCAN911LZE/} has in progress subobject quality standard {encode3-dnase|/quality-standards/encode3-dnase/} audit_warning: Alignment file {ENCFF984FKS|/files/ENCFF984FKS/} processed by DNase-seq ENCODE3 GRCh38 pipeline ( {ENCPL202DNS|/pipelines/ENCPL202DNS/} ) for GRCh38 assembly has 42828714 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR828FVZ | float |
DNase-seq_ENCSR828FVZ |
DNase-seq ENCSR828FVZ [biosample_summary="Homo sapiens body of pancreas tissue female adult (53 years)"]
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[7, 2.46e+04] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF894HSB.bed.gz | 771.49 KB | eaf8a3aac027a9b3dc55f7929ca61854 |
| ENCFF894HSB.bed.gz.dvc | 100.0 B | ae078f344e65815d3ad380906413bbed |
| ENCFF894HSB.tabix.bed.gz | 664.7 KB | 39739cce6348a765639b14b4ca405177 |
| ENCFF894HSB.tabix.bed.gz.dvc | 106.0 B | c3ea55f37b4688f6c804b2b7f6d1f005 |
| ENCFF894HSB.tabix.bed.gz.tbi | 357.66 KB | 49b14b187a7161d42dad140561239801 |
| ENCFF894HSB.tabix.bed.gz.tbi.dvc | 110.0 B | 97e739630ba7c28b2ca5ea84ccf59739 |
| genomic_resource.yaml | 2.01 KB | 9daf38b5d6a58d0667bb3dd5e101d1f5 |
| genomic_resource_original.yaml | 1.91 KB | 1bbfa1311472eb8719fb62d7cdfd0d87 |
| statistics/ |