Resource

Id DNase-seq/ENCSR826ERZcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR826ERZ [biosample_summary="Homo sapiens muscle of arm tissue embryo (101 days)"]
Description
Labels
  • accession: ENCSR826ERZ
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0001499/
  • biosample_summary: Homo sapiens muscle of arm tissue embryo (101 days)
  • date_created: 2015-09-16T21:42:39.637755+00:00
  • date_released: 2013-07-31
  • doi: 10.17989/ENCSR826ERZ
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: embryo (101 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR826ERZ float

DNase-seq_ENCSR826ERZ

DNase-seq ENCSR826ERZ [biosample_summary="Homo sapiens muscle of arm tissue embryo (101 days)"]
HISTOGRAM FOR DNase-seq_ENCSR826ERZ [0.283, 19.2]
n
8,250,667
mean
2.96
sd
2.31

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 82506670.26% 43723
chr1 738862 0.30% 3861
chr2 669413 0.28% 3553
chr3 545573 0.28% 2918
chr4 425687 0.22% 2249
chr5 489602 0.27% 2578
chr6 538022 0.31% 2788
chr7 396416 0.25% 2155
chr8 391935 0.27% 2092
chr9 340028 0.25% 1836
chr10 385875 0.29% 2057
chr11 423633 0.31% 2224
chr12 423247 0.32% 2233
chr13 227722 0.20% 1207
chr14 273038 0.26% 1437
chr15 261437 0.26% 1372
chr16 246421 0.27% 1325
chr17 319156 0.38% 1724
chr18 185231 0.23% 1002
chr19 336695 0.57% 1673
chr20 197249 0.31% 1069
chr21 95828 0.21% 515
chr22 134562 0.26% 737
chrX 197832 0.13% 1080
chrY 7203 0.01% 38
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 43723 2 780 188.7 180
global segment-length histogram

Files

Filename Size md5
ENCFF133KLM.bed.gz 458.85 KB 1aeba659794b7be9bf336ce6752e876a
ENCFF133KLM.tabix.bed.gz 408.58 KB d19348da2d86f6c3ddfa1d33747fa01f
ENCFF133KLM.tabix.bed.gz.tbi 252.96 KB aa0e93fc76ec6f18a3902c0eb74eafb2
genomic_resource.yaml 1.81 KB f0ff6432d65fcebe73e27d4ab815397d
statistics/