DNase-seq_ENCSR826ERZ
DNase-seq ENCSR826ERZ [biosample_summary="Homo sapiens muscle of arm tissue embryo (101 days)"]
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| Id: | DNase-seq/ENCSR826ERZ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR826ERZ [biosample_summary="Homo sapiens muscle of arm tissue embryo (101 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: embryo (101 days) output_type: peaks audit_warning: Alignment file {ENCFF892CSR|/files/ENCFF892CSR/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 24774525 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR826ERZ | float |
DNase-seq_ENCSR826ERZ |
DNase-seq ENCSR826ERZ [biosample_summary="Homo sapiens muscle of arm tissue embryo (101 days)"]
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[0.283, 19.2] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF133KLM.bed.gz | 458.85 KB | 1aeba659794b7be9bf336ce6752e876a |
| ENCFF133KLM.bed.gz.dvc | 100.0 B | 6167177256d048dd1ce7c284a41ce4f8 |
| ENCFF133KLM.tabix.bed.gz | 408.58 KB | d19348da2d86f6c3ddfa1d33747fa01f |
| ENCFF133KLM.tabix.bed.gz.dvc | 106.0 B | d3d8e593112ee2b34818dd02172f6c24 |
| ENCFF133KLM.tabix.bed.gz.tbi | 252.96 KB | aa0e93fc76ec6f18a3902c0eb74eafb2 |
| ENCFF133KLM.tabix.bed.gz.tbi.dvc | 110.0 B | f7c513d2fe424bac0c2bf152e42af8e0 |
| genomic_resource.yaml | 1.81 KB | f0ff6432d65fcebe73e27d4ab815397d |
| genomic_resource_original.yaml | 1.72 KB | 96cb4fe03614a7b5b0fa40ba3fcdaee7 |
| statistics/ |