DNase-seq_ENCSR811OUF
DNase-seq ENCSR811OUF [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (86 years)"]
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| Id: | DNase-seq/ENCSR811OUF |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR811OUF [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (86 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: male adult (86 years) output_type: peaks audit_warning: Signal Portion of Tags (SPOT) is a measure of enrichment, analogous to the commonly used fraction of reads in peaks metric. ENCODE processed alignment files {ENCFF507QWT|/files/ENCFF507QWT/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ({ENCPL848KLD|/pipelines/ENCPL848KLD/}) for GRCh38 assembly have a SPOT1 score of 0.34. According to ENCODE standards, SPOT1 score of 0.4 or higher is considered a product of high quality data. Any sample with a SPOT1 score <0.3 should be targeted for replacement with a higher quality sample, and a SPOT1 score of 0.25 is considered minimally acceptable SPOT1 score of 0.25 is considered minimally acceptable for rare and hard to find primary tissues. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR811OUF | float |
DNase-seq_ENCSR811OUF |
DNase-seq ENCSR811OUF [biosample_summary="Homo sapiens dorsolateral prefrontal cortex tissue male adult (86 years)"]
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[0.0865, 18.3] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF750SYW.bed.gz | 589.45 KB | ed2e4fd74fa4de337c718a7e2bf22445 |
| ENCFF750SYW.bed.gz.dvc | 100.0 B | 63b2656205f2f4310a62ed70e71e76b1 |
| ENCFF750SYW.tabix.bed.gz | 535.8 KB | 67dd5b1cdf6d187268cb4b848e3f5e16 |
| ENCFF750SYW.tabix.bed.gz.dvc | 106.0 B | 19a89d75f38e39513e0067d5ee3ed5ea |
| ENCFF750SYW.tabix.bed.gz.tbi | 249.57 KB | 9f49b2c3bd7c163ce9bdc6aafe9260bf |
| ENCFF750SYW.tabix.bed.gz.tbi.dvc | 110.0 B | 6909c73e0026b06d8fa07cc702325038 |
| genomic_resource.yaml | 2.09 KB | c565f12e75ca658154d5e5bb88f1bf57 |
| genomic_resource_original.yaml | 1.97 KB | 33e16007471389526e6373739065605f |
| statistics/ |