DNase-seq_ENCSR805EGZ
DNase-seq ENCSR805EGZ [biosample_summary="Homo sapiens heart left ventricle tissue female adult (56 years)"]
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| Id: | DNase-seq/ENCSR805EGZ |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR805EGZ [biosample_summary="Homo sapiens heart left ventricle tissue female adult (56 years)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female adult (56 years) output_type: peaks audit_warning: Signal Portion of Tags (SPOT) is a measure of enrichment, analogous to the commonly used fraction of reads in peaks metric. ENCODE processed alignment files {ENCFF221NLC|/files/ENCFF221NLC/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ({ENCPL848KLD|/pipelines/ENCPL848KLD/}) for GRCh38 assembly have a SPOT1 score of 0.30. According to ENCODE standards, SPOT1 score of 0.4 or higher is considered a product of high quality data. Any sample with a SPOT1 score <0.3 should be targeted for replacement with a higher quality sample, and a SPOT1 score of 0.25 is considered minimally acceptable SPOT1 score of 0.25 is considered minimally acceptable for rare and hard to find primary tissues. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR805EGZ | float |
DNase-seq_ENCSR805EGZ |
DNase-seq ENCSR805EGZ [biosample_summary="Homo sapiens heart left ventricle tissue female adult (56 years)"]
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[0.0881, 15.9] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF770BCH.bed.gz | 653.73 KB | dc3bc699eb71274206e1fa0b0cd18746 |
| ENCFF770BCH.bed.gz.dvc | 100.0 B | 64539b3ba4a9941385b1c81ae5c9d5bb |
| ENCFF770BCH.tabix.bed.gz | 593.44 KB | 6371f5bf6f15316a0ffd4bf2f7fdd7d3 |
| ENCFF770BCH.tabix.bed.gz.dvc | 106.0 B | f25f1e6762af1b0ff7af08b2727034de |
| ENCFF770BCH.tabix.bed.gz.tbi | 269.72 KB | 57730a822ab5100eb9ecdce44c2ce106 |
| ENCFF770BCH.tabix.bed.gz.tbi.dvc | 110.0 B | 14dcbee447aa7efb16723a415bdbf1bd |
| genomic_resource.yaml | 2.07 KB | b7d99dce82e3b9aba0dab473750b53ef |
| genomic_resource_original.yaml | 1.96 KB | 38cf9d24f8fa32130b3cf6eae5b617c7 |
| statistics/ |