Resource

Id DNase-seq/ENCSR804RSIcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR804RSI [biosample_summary="Homo sapiens heart tissue embryo (80 days)"]
Description
Labels
  • accession: ENCSR804RSI
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/tissue_UBERON_0000948/
  • biosample_summary: Homo sapiens heart tissue embryo (80 days)
  • date_created: 2015-03-27T04:26:50.747689+00:00
  • date_released: 2016-05-09
  • doi: 10.17989/ENCSR804RSI
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: embryo (80 days)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR804RSI float

DNase-seq_ENCSR804RSI
DNase-seq ENCSR804RSI [biosample_summary="Homo sapiens heart tissue embryo (80 days)"]
 HISTOGRAM FOR DNase-seq_ENCSR804RSI [0.0284, 18.5]
n
37,973,805
mean
1.25
sd
1.54

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 379738051.18% 176694
chr1 3562655 1.43% 16272
chr2 2995023 1.24% 14148
chr3 2523189 1.27% 11665
chr4 1953516 1.03% 9065
chr5 2172183 1.20% 10157
chr6 2367247 1.39% 10848
chr7 1952812 1.23% 9148
chr8 1774760 1.22% 8283
chr9 1581065 1.14% 7381
chr10 1968557 1.47% 9047
chr11 1929239 1.43% 8967
chr12 1874432 1.41% 8637
chr13 1060370 0.93% 5017
chr14 1118223 1.04% 5204
chr15 1297503 1.27% 5980
chr16 1139246 1.26% 5402
chr17 1605636 1.93% 7429
chr18 907384 1.13% 4185
chr19 1205111 2.06% 5548
chr20 929068 1.44% 4417
chr21 425094 0.91% 2014
chr22 671405 1.32% 3182
chrX 959270 0.61% 4692
chrY 817 <0.01% 6
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 176694 1 1240 214.91 200
global segment-length histogram

Files

Filename Size md5
ENCFF944OVS.bed.gz 1.87 MB c3924ab1fd7641c192ca7d4061a764ee
ENCFF944OVS.tabix.bed.gz 1.73 MB afc11c40c6d03525de89e7b48f8bd484
ENCFF944OVS.tabix.bed.gz.tbi 568.37 KB 0d1c29c31579f138de7ed358761389a6
genomic_resource.yaml 1.17 KB 353928700fdcc691c32472c3f26c749c
statistics/