DNase-seq_ENCSR803VCR
DNase-seq ENCSR803VCR [biosample_summary="Homo sapiens left lung tissue female embryo (91 days)"]
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| Id: | DNase-seq/ENCSR803VCR |
| Type: | position_score |
| Version: | 0 |
| Summary: |
DNase-seq ENCSR803VCR [biosample_summary="Homo sapiens left lung tissue female embryo (91 days)"] |
| Description: |
status: released biological_replicates: Rep 1 summary: female embryo (91 days) output_type: peaks audit_warning: Alignment file {ENCFF288UKL|/files/ENCFF288UKL/} processed by DNase-seq ENCODE4 v3.0.0-alpha.2 GRCh38 pipeline ( {ENCPL848KLD|/pipelines/ENCPL848KLD/} ) for GRCh38 assembly has 33169190 mapped reads. According to ENCODE standards, conventional DNase-seq profile requires a minimum of 20 million uniquely mapped reads to generate a reliable SPOT (Signal Portion of Tags) score. The recommended value is > 50 million. For deep, foot-printing depth DNase-seq 150-200 million uniquely mapped reads are recommended. (See {ENCODE DNase-seq data standards|/data-standards/dnase-seq-encode4/}) |
| Labels: |
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| ID | Type | Default annotation | Description | Histogram | Range |
|---|---|---|---|---|---|
| DNase-seq_ENCSR803VCR | float |
DNase-seq_ENCSR803VCR |
DNase-seq ENCSR803VCR [biosample_summary="Homo sapiens left lung tissue female embryo (91 days)"]
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[0.242, 18.5] |
| Filename | Size | md5 |
|---|---|---|
| ENCFF624WLO.bed.gz | 677.24 KB | e1a75257a8069e6005c4f7c03753d33f |
| ENCFF624WLO.bed.gz.dvc | 100.0 B | 230e77a0dabbf5d8713fedad3e14eef2 |
| ENCFF624WLO.tabix.bed.gz | 610.92 KB | f4bf1deb089fc204156e88c5a5817568 |
| ENCFF624WLO.tabix.bed.gz.dvc | 106.0 B | 303972fd786e594fb567272035efd21f |
| ENCFF624WLO.tabix.bed.gz.tbi | 338.01 KB | b9f1ea4a54eeb0a1d9ee3c78d7c1ec19 |
| ENCFF624WLO.tabix.bed.gz.tbi.dvc | 110.0 B | de47380baf46182f3b068b006eb7db82 |
| genomic_resource.yaml | 1.83 KB | a1534450e0045b63ab9f76b36f2a974a |
| genomic_resource_original.yaml | 1.73 KB | aad1c725c1483d652df04d5c01b49e73 |
| statistics/ |