Resource

Id DNase-seq/ENCSR796PIMcontent_copy
Type position_score
Version 0
Summary DNase-seq ENCSR796PIM [biosample_summary="Homo sapiens naive B cell female adult (39 years)"]
Description
Labels
  • accession: ENCSR796PIM
  • assay_term_name: DNase-seq
  • biosample_ontology: /biosample-types/primary_cell_CL_0000788/
  • biosample_summary: Homo sapiens naive B cell female adult (39 years)
  • date_created: 2022-01-27T17:38:01.847263+00:00
  • date_released: 2022-02-25
  • doi: 10.17989/ENCSR796PIM
  • perturbed: False
  • reference_genome: hg38/genomes/GRCh38-hg38
  • replication_type: unreplicated
  • simple_biosample_summary: female adult (39 years)
  • status: released
  • submitter_comment:

Scores (1)

ID Type Default annotation Description Histogram Range Summary
DNase-seq_ENCSR796PIM float

DNase-seq_ENCSR796PIM
DNase-seq ENCSR796PIM [biosample_summary="Homo sapiens naive B cell female adult (39 years)"]
 HISTOGRAM FOR DNase-seq_ENCSR796PIM [0.065, 17.8]
n
12,287,357
mean
1.73
sd
1.88

n counts base pairs; sd is the population standard deviation.

Coverage

Chromosome Covered positions Covered % Segments
all chromosomes 122873570.38% 52497
chr1 1198498 0.48% 4981
chr2 1047785 0.43% 4603
chr3 629990 0.32% 2676
chr4 337334 0.18% 1351
chr5 592875 0.33% 2500
chr6 605813 0.35% 2572
chr7 493873 0.31% 2104
chr8 456454 0.31% 1908
chr9 516846 0.37% 2271
chr10 652039 0.49% 2888
chr11 648918 0.48% 2756
chr12 544675 0.41% 2243
chr13 202014 0.18% 859
chr14 408742 0.38% 1769
chr15 499703 0.49% 2253
chr16 495638 0.55% 2126
chr17 772609 0.93% 3242
chr18 191988 0.24% 893
chr19 740132 1.26% 2986
chr20 352762 0.55% 1584
chr21 199294 0.43% 892
chr22 408785 0.80% 1845
chrX 290362 0.19% 1192
chrY 228 <0.01% 3
3342 contigs with no values (129077085 bp) 0 0.00% 0

Segment lengths

segments min max mean median
segments 52497 1 1240 234.06 220
global segment-length histogram

Files

Filename Size md5
ENCFF824LVP.bed.gz 547.03 KB 3cd91247b0bd5fecc237d446c30f0a00
ENCFF824LVP.tabix.bed.gz 509.81 KB 67189af1ded1fd66064e34c3bbf9c6c1
ENCFF824LVP.tabix.bed.gz.tbi 172.9 KB 0d1efcdfd269d18585f2749506d4ddb7
genomic_resource.yaml 2.02 KB 9226171fe923cff8e75c014fd7a2bfec
statistics/